RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 TEX2Q8IWB9 1127 aa21.28■■□□□ 1
SEMA3B-202ENST00000418576 FAM177A1Q8N128 213 aaPredicted RBP21.28■■□□□ 1
SEMA3B-202ENST00000418576 ALG1Q9BT22 464 aa21.28■■□□□ 1
SEMA3B-202ENST00000418576 KIF3AQ9Y496 699 aa21.28■■□□□ 1
SEMA3B-202ENST00000418576 CASP8AP2Q9UKL3 1982 aa21.27■■□□□ 1
SEMA3B-202ENST00000418576 SMCO2A6NFE2 343 aa21.27■■□□□ 1
SEMA3B-202ENST00000418576 POTEB2H3BUK9 544 aa21.27■■□□□ 1
SEMA3B-202ENST00000418576 PGK2P07205 417 aa21.27■■□□□ 1
SEMA3B-202ENST00000418576 FDPSP14324 419 aaKnown RBP21.27■■□□□ 1
SEMA3B-202ENST00000418576 CALML3P27482 149 aa21.27■■□□□ 1
SEMA3B-202ENST00000418576 MRPL12P52815 198 aaKnown RBP21.27■■□□□ 1
SEMA3B-202ENST00000418576 RAET1EQ8TD07 263 aa21.27■■□□□ 1
SEMA3B-202ENST00000418576 VPS54Q9P1Q0 977 aa21.27■■□□□ 1
SEMA3B-202ENST00000418576 GABRQQ9UN88 632 aa21.27■■□□□ 1
SEMA3B-202ENST00000418576 OPLAHO14841 1288 aa21.26■□□□□ 0.99
SEMA3B-202ENST00000418576 DTNBO60941 627 aa21.26■□□□□ 0.99
SEMA3B-202ENST00000418576 CYP2B6P20813 491 aa21.26■□□□□ 0.99
SEMA3B-202ENST00000418576 GNA11P29992 359 aa21.26■□□□□ 0.99
SEMA3B-202ENST00000418576 TYW1BQ6NUM6 668 aa21.26■□□□□ 0.99
SEMA3B-202ENST00000418576 USP6NLQ92738 828 aa21.26■□□□□ 0.99
SEMA3B-202ENST00000418576 APBA2Q99767 749 aa21.26■□□□□ 0.99
SEMA3B-202ENST00000418576 C6orf50Q9HD87 102 aa21.26■□□□□ 0.99
SEMA3B-202ENST00000418576 SMC3Q9UQE7 1217 aa21.26■□□□□ 0.99
SEMA3B-202ENST00000418576 SMCHD1A6NHR9 2005 aa21.26■□□□□ 0.99
SEMA3B-202ENST00000418576 DNAJC25-GNG10A0A024R161 153 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 ESYT2A0FGR8 921 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 HOXC6P09630 235 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 XRCC5P13010 732 aaKnown RBP21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 HSD17B4P51659 736 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 ADCY7P51828 1080 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 GHRHRQ02643 423 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 IRF5Q13568 498 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 BECN1Q14457 450 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 PKN2Q16513 984 aaKnown RBP21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 TBC1D5Q92609 795 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 INTS4Q96HW7 963 aaKnown RBP21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 ZMYND12Q9H0C1 365 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 DIS3Q9Y2L1 958 aaKnown RBP21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 PIK3CDO00329 1044 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 PLXNB2O15031 1838 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 COBLO75128 1261 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 HSP90AA1P07900 732 aaKnown RBP21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 NLRP5P59047 1200 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 TRIM29Q14134 588 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 SLC30A10Q6XR72 485 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 BICD2Q8TD16 824 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 AIFM3Q96NN9 605 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 RIC8AQ9NPQ8 531 aa21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 ADD3Q9UEY8 706 aaKnown RBP21.25■□□□□ 0.99
SEMA3B-202ENST00000418576 HOXA13P31271 388 aaPredicted RBP21.24■□□□□ 0.99
SEMA3B-202ENST00000418576 ZNF792Q3KQV3 632 aa21.24■□□□□ 0.99
SEMA3B-202ENST00000418576 TRMT44Q8IYL2 757 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-202ENST00000418576 FAM133AQ8N9E0 248 aa21.24■□□□□ 0.99
SEMA3B-202ENST00000418576 PTPN22Q9Y2R2 807 aa21.24■□□□□ 0.99
SEMA3B-202ENST00000418576 ZSWIM8A7E2V4 1837 aa21.24■□□□□ 0.99
SEMA3B-202ENST00000418576 CNTN2Q02246 1040 aa21.23■□□□□ 0.99
SEMA3B-202ENST00000418576 GALNT17Q6IS24 598 aa21.23■□□□□ 0.99
SEMA3B-202ENST00000418576 SYTL5Q8TDW5 730 aaPredicted RBP21.23■□□□□ 0.99
SEMA3B-202ENST00000418576 ZNF236Q9UL36 1845 aa21.23■□□□□ 0.99
SEMA3B-202ENST00000418576 MEIS2O14770 477 aa21.23■□□□□ 0.99
SEMA3B-202ENST00000418576 GJB2P29033 226 aa21.23■□□□□ 0.99
SEMA3B-202ENST00000418576 USP17L6PQ6QN14 398 aa21.23■□□□□ 0.99
SEMA3B-202ENST00000418576 DNERQ8NFT8 737 aa21.23■□□□□ 0.99
SEMA3B-202ENST00000418576 MPHOSPH6Q99547 160 aaKnown RBP21.23■□□□□ 0.99
SEMA3B-202ENST00000418576 DOCK3Q8IZD9 2030 aa21.23■□□□□ 0.99
SEMA3B-202ENST00000418576 NPLOC4Q8TAT6 608 aa21.22■□□□□ 0.99
SEMA3B-202ENST00000418576 PXYLP1Q8TE99 480 aa21.22■□□□□ 0.99
SEMA3B-202ENST00000418576 MAML3Q96JK9 1138 aa21.22■□□□□ 0.99
SEMA3B-202ENST00000418576 C8orf76Q96K31 380 aa21.22■□□□□ 0.99
SEMA3B-202ENST00000418576 SPDYE3A6NKU9 549 aa21.21■□□□□ 0.99
SEMA3B-202ENST00000418576 B4DLN1 442 aa21.21■□□□□ 0.99
SEMA3B-202ENST00000418576 MCTP2Q6DN12 878 aa21.21■□□□□ 0.99
SEMA3B-202ENST00000418576 ZNF467Q7Z7K2 595 aaPredicted RBP21.21■□□□□ 0.99
SEMA3B-202ENST00000418576 FCHSD1Q86WN1 690 aa21.21■□□□□ 0.99
SEMA3B-202ENST00000418576 NSUN6Q8TEA1 469 aaKnown RBP21.21■□□□□ 0.99
SEMA3B-202ENST00000418576 ADCY3O60266 1144 aa21.2■□□□□ 0.99
SEMA3B-202ENST00000418576 OLFML2BQ68BL8 750 aa21.2■□□□□ 0.99
SEMA3B-202ENST00000418576 MSL3Q8N5Y2 521 aaKnown RBP21.2■□□□□ 0.99
SEMA3B-202ENST00000418576 SLAIN1Q8ND83 568 aa21.2■□□□□ 0.99
SEMA3B-202ENST00000418576 RMDN3Q96TC7 470 aa21.2■□□□□ 0.99
SEMA3B-202ENST00000418576 PHF20Q9BVI0 1012 aa21.2■□□□□ 0.99
SEMA3B-202ENST00000418576 BRMS1Q9HCU9 246 aa21.2■□□□□ 0.99
SEMA3B-202ENST00000418576 PCDHA4Q9UN74 947 aa21.2■□□□□ 0.99
SEMA3B-202ENST00000418576 PTCH2Q9Y6C5 1203 aa21.2■□□□□ 0.99
SEMA3B-202ENST00000418576 LOC102724159A0A0B4J2E5 919 aa21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 ASB14A6NK59 587 aa21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 FOSP01100 380 aaPredicted RBP21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 PWP2Q15269 919 aaKnown RBP21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 UBE2SQ16763 222 aa21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 ARHGEF16Q5VV41 709 aa21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 FBXO46Q6PJ61 603 aaPredicted RBP21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 REXO1Q8N1G1 1221 aaKnown RBP21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 PURBQ96QR8 312 aaKnown RBP21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 TAAR1Q96RJ0 339 aa21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 COL20A1Q9P218 1284 aa21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 KCNJ14Q9UNX9 436 aa21.2■□□□□ 0.98
SEMA3B-202ENST00000418576 ZNFX1Q9P2E3 1918 aaKnown RBP21.19■□□□□ 0.98
SEMA3B-202ENST00000418576 SOWAHBA6NEL2 793 aa21.19■□□□□ 0.98
SEMA3B-202ENST00000418576 ALDH5A1P51649 535 aaPredicted RBP21.19■□□□□ 0.98
SEMA3B-202ENST00000418576 AP3B2Q13367 1082 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms