RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SP110Q9HB58 689 aa3.9□□□□□ -1.79
VPS41-206ENST00000418457 GPR160Q9UJ42 338 aa3.9□□□□□ -1.79
VPS41-206ENST00000418457 TMA7Q9Y2S6 64 aaKnown RBP3.9□□□□□ -1.79
VPS41-206ENST00000418457 MRPL42Q9Y6G3 142 aaKnown RBP3.9□□□□□ -1.79
VPS41-206ENST00000418457 NPHS1O60500 1241 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 PSPNO60542 156 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 TRHRP34981 398 aaPredicted RBP3.89□□□□□ -1.79
VPS41-206ENST00000418457 LTBRP36941 435 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 SQSTM1Q13501 440 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 SNX17Q15036 470 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 TESK1Q15569 626 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 TIGD5Q53EQ6 642 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 DENND5AQ6IQ26 1287 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 NUP43Q8NFH3 380 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 DCAF4Q8WV16 495 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 KISS1RQ969F8 398 aaPredicted RBP3.89□□□□□ -1.79
VPS41-206ENST00000418457 PLCD4Q9BRC7 762 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 IMPACTQ9P2X3 320 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 TMEFF2Q9UIK5 374 aaPredicted RBP3.89□□□□□ -1.79
VPS41-206ENST00000418457 ACSL6Q9UKU0 697 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 MRPS23Q9Y3D9 190 aaKnown RBP3.89□□□□□ -1.79
VPS41-206ENST00000418457 TBX22Q9Y458 520 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 DCAF1Q9Y4B6 1507 aa3.89□□□□□ -1.79
VPS41-206ENST00000418457 A0A1W2PQJ5 194 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 ESYT3A0FGR9 886 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 TLDC2A0PJX2 215 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 BLACEA4D250 179 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 C7orf72A4D263 438 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 NOTOA8MTQ0 251 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 MYO1BO43795 1136 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 PRKCAP17252 672 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 JUNBP17275 347 aaPredicted RBP3.88□□□□□ -1.79
VPS41-206ENST00000418457 GTF2A2P52657 109 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 CORO7P57737 925 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 RPL11P62913 178 aaKnown RBP3.88□□□□□ -1.79
VPS41-206ENST00000418457 NTRK3Q16288 839 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 KCNMB1Q16558 191 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 INF2Q27J81 1249 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 FYB2Q5VWT5 728 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 MBLAC2Q68D91 279 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 RSPO2Q6UXX9 243 aaPredicted RBP3.88□□□□□ -1.79
VPS41-206ENST00000418457 NLRX1Q86UT6 975 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 ZSWIM9Q86XI8 627 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 HOMER1Q86YM7 354 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 CCDC103Q8IW40 242 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 NLGN2Q8NFZ4 835 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 APPBP2Q92624 585 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 ASIC4Q96FT7 647 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 RNF32Q9H0A6 362 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 TMEM260Q9NX78 707 aa3.88□□□□□ -1.79
VPS41-206ENST00000418457 ARNTLO00327 626 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 CDC45O75419 566 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 PAPLNO95428 1278 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 EFEMP2O95967 443 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 GLI1P08151 1106 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 LCP1P13796 627 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 PNLIPP16233 465 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 ITGB5P18084 799 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 GALK1P51570 392 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 GABREP78334 506 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 CYP4F8P98187 520 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 MVKQ03426 396 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 KIR3DS1Q14943 382 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 STYK1Q6J9G0 422 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 KCNT2Q6UVM3 1135 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 MAMDC2Q7Z304 686 aaPredicted RBP3.87□□□□□ -1.79
VPS41-206ENST00000418457 SIRT2Q8IXJ6 389 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 RCBTB1Q8NDN9 531 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 PTPRN2Q92932 1015 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 SHISA4Q96DD7 197 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 CHAMP1Q96JM3 812 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 PHF20Q9BVI0 1012 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 CRTAC1Q9NQ79 661 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 PDLIM7Q9NR12 457 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 GPR27Q9NS67 375 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 FANCLQ9NW38 375 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 BTG4Q9NY30 223 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 GULP1Q9UBP9 304 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 YBX2Q9Y2T7 364 aaKnown RBP3.87□□□□□ -1.79
VPS41-206ENST00000418457 RWDD3Q9Y3V2 267 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 PCDHA2Q9Y5H9 948 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 TIMM13Q9Y5L4 95 aaPredicted RBP3.87□□□□□ -1.79
VPS41-206ENST00000418457 NPFFR2Q9Y5X5 522 aa3.87□□□□□ -1.79
VPS41-206ENST00000418457 AQP7O14520 342 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 EFCAB14O75071 495 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 ASMTLO95671 621 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 APPP05067 770 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 C6orf222P0C671 652 aaPredicted RBP3.86□□□□□ -1.79
VPS41-206ENST00000418457 MSL3P1P0C860 447 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 TAL1P17542 331 aaPredicted RBP3.86□□□□□ -1.79
VPS41-206ENST00000418457 TACR1P25103 407 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 ARL4AP40617 200 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 BCL6P41182 706 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 GPR85P60893 370 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 LSAMPQ13449 338 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 TCEA2Q15560 299 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 SDE2Q6IQ49 451 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 C16orf86Q6ZW13 317 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 IFNL3Q8IZI9 196 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 NLGN1Q8N2Q7 840 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms