RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 PYM1Q9BRP8 204 aaKnown RBP13.28□□□□□ -0.28
LIMK1-202ENST00000418310 NLRC4Q9NPP4 1024 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 KBTBD4Q9NVX7 518 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
LIMK1-202ENST00000418310 SLC16A2P36021 539 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 DNM2P50570 870 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 APBA1Q02410 837 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 EZH2Q15910 746 aaKnown RBP13.28□□□□□ -0.28
LIMK1-202ENST00000418310 CRACR2AQ9BSW2 395 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 NYXQ9GZU5 481 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 NHSL1Q5SYE7 1610 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 PDS5AQ29RF7 1337 aaKnown RBP13.27□□□□□ -0.28
LIMK1-202ENST00000418310 RASSF10A6NK89 507 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 PDE2AO00408 941 aaPredicted RBP13.27□□□□□ -0.28
LIMK1-202ENST00000418310 KRT86O43790 486 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 EIF3JO75822 258 aaKnown RBP13.27□□□□□ -0.28
LIMK1-202ENST00000418310 RHOBTB3O94955 611 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 MYBL2P10244 700 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 RFC4P35249 363 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 CYLC1P35663 651 aaPredicted RBP13.27□□□□□ -0.28
LIMK1-202ENST00000418310 GNAQP50148 359 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 RNASE9P60153 205 aaKnown RBP13.27□□□□□ -0.28
LIMK1-202ENST00000418310 AMPD2Q01433 879 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 SLC7A5Q01650 507 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.27□□□□□ -0.28
LIMK1-202ENST00000418310 NEK8Q86SG6 692 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 KIAA0895Q8NCT3 520 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 ZNF507Q8TCN5 953 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 RRP36Q96EU6 259 aaKnown RBP13.27□□□□□ -0.28
LIMK1-202ENST00000418310 HAUS4Q9H6D7 363 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 POLD4Q9HCU8 107 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 CAPN11Q9UMQ6 739 aa13.27□□□□□ -0.28
LIMK1-202ENST00000418310 KDM4FA0A1W2PPD8 638 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 MAP2K7O14733 419 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 ATP8B1O43520 1251 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 NCK2O43639 380 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 BUB1O43683 1085 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 SLC37A4O43826 429 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 MOCS3O95396 460 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 EEF1GP26641 437 aaKnown RBP13.27□□□□□ -0.29
LIMK1-202ENST00000418310 IRX5P78411 483 aaPredicted RBP13.27□□□□□ -0.29
LIMK1-202ENST00000418310 NELFCDQ8IXH7 590 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 TXLNBQ8N3L3 684 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 NGLY1Q96IV0 654 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 C6orf50Q9HD87 102 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
LIMK1-202ENST00000418310 VGLL3A8MV65 326 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 C6orf229H3BNL8 230 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 AKR1B10O60218 316 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 CCNE1P24864 410 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 TDRD12Q587J7 1177 aaKnown RBP13.26□□□□□ -0.29
LIMK1-202ENST00000418310 RRAGAQ7L523 313 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 REXO1Q8N1G1 1221 aaKnown RBP13.26□□□□□ -0.29
LIMK1-202ENST00000418310 MSANTD4Q8NCY6 345 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 CALML4Q96GE6 196 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 UBXN6Q9BZV1 441 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 SEMA6BQ9H3T3 888 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 LCMT1Q9UIC8 334 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 CAPN6Q9Y6Q1 641 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 FLT1P17948 1338 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 M0R2N6 131 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 DNAJC21Q5F1R6 531 aaKnown RBP13.26□□□□□ -0.29
LIMK1-202ENST00000418310 MFSD14BQ5SR56 506 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 C10orf67Q8IYJ2 551 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 WDR66Q8TBY9 1149 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 CDCA7Q9BWT1 371 aaPredicted RBP13.26□□□□□ -0.29
LIMK1-202ENST00000418310 THAP9Q9H5L6 903 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 MYMKA6NI61 221 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 MPHOSPH10O00566 681 aaKnown RBP13.26□□□□□ -0.29
LIMK1-202ENST00000418310 SRGNP10124 158 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 TM4SF1P30408 202 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 KIF5AQ12840 1032 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 SPA17Q15506 151 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 TRAPPC11Q7Z392 1133 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 SNX29Q8TEQ0 813 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 DNAJC7Q99615 494 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 MXD3Q9BW11 206 aa13.26□□□□□ -0.29
LIMK1-202ENST00000418310 SPATA31A5Q5VU36 1347 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 SPATA31A7Q8IWB4 1347 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 PALM3A6NDB9 673 aaPredicted RBP13.25□□□□□ -0.29
LIMK1-202ENST00000418310 ZNF263O14978 683 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 TRIM66O15016 1216 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 CALCRLQ16602 461 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 KCNK18Q7Z418 384 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 MMTAG2Q9BU76 263 aaKnown RBP13.25□□□□□ -0.29
LIMK1-202ENST00000418310 CCSER1Q9C0I3 900 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 FAM204AQ9H8W3 233 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 MKRN1Q9UHC7 482 aaKnown RBP13.25□□□□□ -0.29
LIMK1-202ENST00000418310 RAB21Q9UL25 225 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 PHLPP1O60346 1717 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 POTEB2H3BUK9 544 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 KRT83P78385 493 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 GPSM2P81274 684 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 TAF3Q5VWG9 929 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 DNAAF5Q86Y56 855 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 HDAC7Q8WUI4 952 aa13.25□□□□□ -0.29
LIMK1-202ENST00000418310 EIF4A3P38919 411 aaKnown RBP13.24□□□□□ -0.29
LIMK1-202ENST00000418310 NFRKBQ6P4R8 1299 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 LEKR1Q6ZMV7 388 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms