RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 ZBED4O75132 1171 aa23.62■■□□□ 1.37
CASC3-203ENST00000418132 DSG3P32926 999 aa23.62■■□□□ 1.37
CASC3-203ENST00000418132 COG2Q14746 738 aa23.62■■□□□ 1.37
CASC3-203ENST00000418132 ATG4CQ96DT6 458 aa23.62■■□□□ 1.37
CASC3-203ENST00000418132 P2RX7Q99572 595 aaKnown RBP23.62■■□□□ 1.37
CASC3-203ENST00000418132 MYPNQ86TC9 1320 aa23.62■■□□□ 1.37
CASC3-203ENST00000418132 KINO60870 393 aaKnown RBP23.61■■□□□ 1.37
CASC3-203ENST00000418132 PPIL2Q13356 520 aa23.61■■□□□ 1.37
CASC3-203ENST00000418132 LRSAM1Q6UWE0 723 aa23.61■■□□□ 1.37
CASC3-203ENST00000418132 TMEM60Q9H2L4 133 aa23.61■■□□□ 1.37
CASC3-203ENST00000418132 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.61■■□□□ 1.37
CASC3-203ENST00000418132 KCNH4Q9UQ05 1017 aa23.61■■□□□ 1.37
CASC3-203ENST00000418132 A0A0G2JLL6 359 aaPredicted RBP23.61■■□□□ 1.37
CASC3-203ENST00000418132 PRPHP41219 470 aa23.61■■□□□ 1.37
CASC3-203ENST00000418132 FMR1Q06787 632 aaKnown RBP eCLIP23.61■■□□□ 1.37
CASC3-203ENST00000418132 PPP4R3AQ6IN85 833 aa23.61■■□□□ 1.37
CASC3-203ENST00000418132 RBM43Q6ZSC3 357 aaKnown RBP23.61■■□□□ 1.37
CASC3-203ENST00000418132 PRRT2Q7Z6L0 340 aaPredicted RBP23.61■■□□□ 1.37
CASC3-203ENST00000418132 TNMDQ9H2S6 317 aa23.61■■□□□ 1.37
CASC3-203ENST00000418132 NMRK2Q9NPI5 230 aa23.61■■□□□ 1.37
CASC3-203ENST00000418132 NEMFO60524 1076 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 IL17AQ16552 155 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 CAMK4Q16566 473 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 SPECC1Q5M775 1068 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 PROCA1Q8NCQ7 364 aaPredicted RBP23.6■■□□□ 1.37
CASC3-203ENST00000418132 CRYGNQ8WXF5 182 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 RAVER2Q9HCJ3 691 aaKnown RBP23.6■■□□□ 1.37
CASC3-203ENST00000418132 FAM13BQ9NYF5 915 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 VWA3AA6NCI4 1184 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 SPDYE3A6NKU9 549 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 ZNF202O95125 648 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 SYKP43405 635 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 USP11P51784 963 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 CPXCR1Q8N123 301 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 REPS2Q8NFH8 660 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 NAP1L4Q99733 375 aaKnown RBP23.6■■□□□ 1.37
CASC3-203ENST00000418132 KCNH3Q9ULD8 1083 aa23.6■■□□□ 1.37
CASC3-203ENST00000418132 CTDP1Q9Y5B0 961 aaPredicted RBP23.6■■□□□ 1.37
CASC3-203ENST00000418132 GCOM1H8Y6P7 765 aaPredicted RBP23.59■■□□□ 1.37
CASC3-203ENST00000418132 CFBP00751 764 aa23.59■■□□□ 1.37
CASC3-203ENST00000418132 POLR2MP0CAP2 368 aa23.59■■□□□ 1.37
CASC3-203ENST00000418132 GCFC2P16383 781 aaKnown RBP23.59■■□□□ 1.37
CASC3-203ENST00000418132 HOXA13P31271 388 aaPredicted RBP23.59■■□□□ 1.37
CASC3-203ENST00000418132 TBC1D5Q92609 795 aa23.59■■□□□ 1.37
CASC3-203ENST00000418132 WNK4Q96J92 1243 aa23.59■■□□□ 1.37
CASC3-203ENST00000418132 ZNF408Q9H9D4 720 aa23.59■■□□□ 1.37
CASC3-203ENST00000418132 COL11A1P12107 1806 aaPredicted RBP23.58■■□□□ 1.37
CASC3-203ENST00000418132 CTAGE5O15320 804 aa23.58■■□□□ 1.37
CASC3-203ENST00000418132 TDP2O95551 362 aa23.58■■□□□ 1.37
CASC3-203ENST00000418132 OR52Z1P0C646 297 aa23.58■■□□□ 1.37
CASC3-203ENST00000418132 OAZ1P54368 228 aa23.58■■□□□ 1.37
CASC3-203ENST00000418132 FKBP1BP68106 108 aa23.58■■□□□ 1.37
CASC3-203ENST00000418132 GHRHRQ02643 423 aa23.58■■□□□ 1.37
CASC3-203ENST00000418132 CLEC4DQ8WXI8 215 aa23.58■■□□□ 1.37
CASC3-203ENST00000418132 OPTNQ96CV9 577 aa23.58■■□□□ 1.37
CASC3-203ENST00000418132 TIGD1Q96MW7 591 aa23.58■■□□□ 1.37
CASC3-203ENST00000418132 HOXC10Q9NYD6 342 aa23.58■■□□□ 1.37
CASC3-203ENST00000418132 LONP1P36776 959 aaKnown RBP23.58■■□□□ 1.36
CASC3-203ENST00000418132 SREBF1P36956 1147 aa23.58■■□□□ 1.36
CASC3-203ENST00000418132 TREML2Q5T2D2 321 aa23.58■■□□□ 1.36
CASC3-203ENST00000418132 DTHD1Q6ZMT9 781 aa23.58■■□□□ 1.36
CASC3-203ENST00000418132 USP49Q70CQ1 688 aa23.58■■□□□ 1.36
CASC3-203ENST00000418132 HOXA7P31268 230 aaPredicted RBP23.57■■□□□ 1.36
CASC3-203ENST00000418132 ARHGAP4P98171 946 aa23.57■■□□□ 1.36
CASC3-203ENST00000418132 MOXD1Q6UVY6 613 aa23.57■■□□□ 1.36
CASC3-203ENST00000418132 CYP3A7-CYP3A51PA0A087WV96 503 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 SPDYE16A6NNV3 312 aaPredicted RBP23.56■■□□□ 1.36
CASC3-203ENST00000418132 ATP2A1O14983 1001 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 SLC37A4O43826 429 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 ALAS1P13196 640 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 CYP3A7P24462 503 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 HSD17B4P51659 736 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 POTEDQ86YR6 584 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 MTMR9Q96QG7 549 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 ZNF214Q9UL59 606 aaPredicted RBP23.56■■□□□ 1.36
CASC3-203ENST00000418132 GADL1Q6ZQY3 521 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 MCF2L2Q86YR7 1114 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 SAMD3Q8N6K7 520 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 SYMPKQ92797 1274 aaKnown RBP23.56■■□□□ 1.36
CASC3-203ENST00000418132 SLC10A4Q96EP9 437 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 EPSTI1Q96J88 318 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 MBOAT7Q96N66 472 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 FUCA2Q9BTY2 467 aa23.56■■□□□ 1.36
CASC3-203ENST00000418132 GBA2Q9HCG7 927 aaPredicted RBP23.55■■□□□ 1.36
CASC3-203ENST00000418132 DDX25Q9UHL0 483 aaKnown RBP23.55■■□□□ 1.36
CASC3-203ENST00000418132 RBBP6Q7Z6E9 1792 aaKnown RBP23.55■■□□□ 1.36
CASC3-203ENST00000418132 NFIBO00712 420 aa23.54■■□□□ 1.36
CASC3-203ENST00000418132 FCHSD1Q86WN1 690 aa23.54■■□□□ 1.36
CASC3-203ENST00000418132 CKAP2LQ8IYA6 745 aa23.54■■□□□ 1.36
CASC3-203ENST00000418132 ZNF526Q8TF50 670 aaPredicted RBP23.54■■□□□ 1.36
CASC3-203ENST00000418132 SDF4Q9BRK5 362 aa23.54■■□□□ 1.36
CASC3-203ENST00000418132 MAP3K20Q9NYL2 800 aaKnown RBP23.54■■□□□ 1.36
CASC3-203ENST00000418132 CYP3A4P08684 503 aa23.54■■□□□ 1.36
CASC3-203ENST00000418132 GJA5P36382 358 aa23.54■■□□□ 1.36
CASC3-203ENST00000418132 MOGSQ13724 837 aa23.54■■□□□ 1.36
CASC3-203ENST00000418132 TMEM132BQ14DG7 1078 aa23.54■■□□□ 1.36
CASC3-203ENST00000418132 CALCRLQ16602 461 aa23.54■■□□□ 1.36
CASC3-203ENST00000418132 MUM1L1Q5H9M0 696 aa23.54■■□□□ 1.36
CASC3-203ENST00000418132 A0A0G2JMZ2 1700 aa23.53■■□□□ 1.36
CASC3-203ENST00000418132 CIITAP33076 1130 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms