RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 EIF4A2Q14240 407 aaKnown RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 PPP1R7Q15435 360 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 WASHC4Q2M389 1173 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 CCDC122Q5T0U0 273 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 C1QTNF12Q5T7M4 302 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 SLC9C2Q5TAH2 1124 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 GKAP1Q5VSY0 366 aaPredicted RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 HHATQ5VTY9 493 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 CHADLQ6NUI6 762 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 NCAPG2Q86XI2 1143 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 TRMT44Q8IYL2 757 aaKnown RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 FBXL16Q8N461 479 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 FAM81AQ8TBF8 368 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 CCT6BQ92526 530 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 L3MBTL3Q96JM7 780 aaPredicted RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 NUP88Q99567 741 aaPredicted RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 NCOA5Q9HCD5 579 aaKnown RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 PPANQ9NQ55 473 aaKnown RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 BABAM1Q9NWV8 329 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 SLC5A4Q9NY91 659 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 LEMD3Q9Y2U8 911 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 PASKQ96RG2 1323 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 DICER1Q9UPY3 1922 aaKnown RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 ADAMTS7Q9UKP4 1686 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 RASSF10A6NK89 507 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 SPDYE3A6NKU9 549 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 B4DLN1 442 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 TRAPPC3O43617 180 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 SMIM24O75264 130 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 KRT14P02533 472 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 PYGLP06737 847 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 GNAT1P11488 350 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 PRLRP16471 622 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 ATP4AP20648 1035 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 KIF5BP33176 963 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 LBX1P52954 281 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 PAK2Q13177 524 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 SEPT2Q15019 361 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 KIAA0753Q2KHM9 967 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 LRRC23Q53EV4 343 aaPredicted RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 TTC39AQ5SRH9 613 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 CDKAL1Q5VV42 579 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 IFT20Q8IY31 132 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 BICD1Q96G01 975 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 CCDC43Q96MW1 224 aaKnown RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 ZNF570Q96NI8 536 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 LRRC1Q9BTT6 524 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 BOLA2Q9H3K6 86 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 SENP2Q9HC62 589 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 JADE2Q9NQC1 790 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 LMCD1Q9NZU5 365 aa6.54□□□□□ -1.36
NPHP1-204ENST00000417665 IQSEC3Q9UPP2 1182 aaPredicted RBP6.54□□□□□ -1.36
NPHP1-204ENST00000417665 SYNRGQ9UMZ2 1314 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 LRRD1A4D1F6 860 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 ZNF233A6NK53 670 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 NFKBIEO00221 500 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 PDE2AO00408 941 aaPredicted RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 POLRMTO00411 1230 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 PAEPP09466 180 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 HSPA8P11142 646 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 ALADP13716 330 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 IDEP14735 1019 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 PHKG2P15735 406 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 CNGA1P29973 690 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 TM4SF1P30408 202 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 PIP4K2AP48426 406 aaPredicted RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 VEGFBP49765 207 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 SPAG1Q07617 926 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 DYNC1I2Q13409 638 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 CUL3Q13618 768 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 PTPAQ15257 358 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 IFI16Q16666 785 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 TSR1Q2NL82 804 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 MCMDC2Q4G0Z9 681 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 OTUD7BQ6GQQ9 843 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 LRIG3Q6UXM1 1119 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 STOX1Q6ZVD7 989 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 MIPOL1Q8TD10 442 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 RNF25Q96BH1 459 aaPredicted RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 GORASP1Q9BQQ3 440 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 MMTAG2Q9BU76 263 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 TSGA10Q9BZW7 698 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 SWAP70Q9UH65 585 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 SRP68Q9UHB9 627 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 DMGDHQ9UI17 866 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 SH3TC1Q8TE82 1336 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 CCT8L1PA6NM43 557 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 KIF28PB7ZC32 967 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 IFIT3O14879 490 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 RNF8O76064 485 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 SASH1O94885 1247 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 NPTXRO95502 500 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 VIMP08670 466 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 KRT9P35527 623 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 CYLC1P35663 651 aaPredicted RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 RANBP1P43487 201 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 CCNG1P51959 295 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 BIRC3Q13489 604 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 ZNF268Q14587 947 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms