RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 NR1D1P20393 614 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 CCNE1P24864 410 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 TDO2P48775 406 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 SEC24CP53992 1094 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 CTSWP56202 376 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 NKX1-1Q15270 411 aaPredicted RBP8.73□□□□□ -1.01
VRK2-203ENST00000417641 CCDC40Q4G0X9 1142 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 CFAP58Q5T655 872 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 CCDC13Q8IYE1 715 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 C3orf20Q8ND61 904 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 MAGEC3Q8TD91 643 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 IQCDQ96DY2 449 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 CNOT6LQ96LI5 555 aaKnown RBP8.73□□□□□ -1.01
VRK2-203ENST00000417641 RUFY1Q96T51 708 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 UBAC1Q9BSL1 405 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 NACAP1Q9BZK3 213 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 CNNM1Q9NRU3 951 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 MAGEC2Q9UBF1 373 aaPredicted RBP8.73□□□□□ -1.01
VRK2-203ENST00000417641 CCDC189A1A4V9 331 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 VEGFAP15692 232 aaPredicted RBP8.73□□□□□ -1.01
VRK2-203ENST00000417641 HSPA9P38646 679 aaKnown RBP8.73□□□□□ -1.01
VRK2-203ENST00000417641 STAT6P42226 847 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 MATR3P43243 847 aaKnown RBP eCLIP8.73□□□□□ -1.011e-12■■■■■ 44.7
VRK2-203ENST00000417641 KIF11P52732 1056 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 NEDD9Q14511 834 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 PUM3Q15397 648 aaKnown RBP8.73□□□□□ -1.01
VRK2-203ENST00000417641 SPA17Q15506 151 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 CCDC96Q2M329 555 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 SPRED3Q2MJR0 410 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 COBLL1Q53SF7 1204 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 ANKRD40Q6AI12 368 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 C8orf74Q6P047 294 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 PIK3AP1Q6ZUJ8 805 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 NLRP10Q86W26 655 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 IFT20Q8IY31 132 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 SRBD1Q8N5C6 995 aaKnown RBP8.73□□□□□ -1.01
VRK2-203ENST00000417641 CASKIN2Q8WXE0 1202 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 P2RX5Q93086 422 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 MTMR8Q96EF0 704 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 CCDC42Q96M95 316 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 ZSCAN10Q96SZ4 725 aaPredicted RBP8.73□□□□□ -1.01
VRK2-203ENST00000417641 IFIH1Q9BYX4 1025 aaKnown RBP8.73□□□□□ -1.01
VRK2-203ENST00000417641 TMBIM4Q9HC24 238 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 POLD4Q9HCU8 107 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 RNF14Q9UBS8 474 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 NFU1Q9UMS0 254 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 PLCH1Q4KWH8 1693 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 MYH6P13533 1939 aa8.73□□□□□ -1.01
VRK2-203ENST00000417641 C5orf60A6NFR6 353 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 ZSCAN5CA6NGD5 496 aaPredicted RBP8.72□□□□□ -1.01
VRK2-203ENST00000417641 HMGB1P1B2RPK0 211 aaPredicted RBP8.72□□□□□ -1.01
VRK2-203ENST00000417641 H0YGN5 161 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 DDAH1O94760 285 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 CXCR5P32302 372 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 ELF1P32519 619 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 MCM7P33993 719 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 EIF4A3P38919 411 aaKnown RBP8.72□□□□□ -1.01
VRK2-203ENST00000417641 SETQ01105 290 aaPredicted RBP8.72□□□□□ -1.01
VRK2-203ENST00000417641 BYSLQ13895 437 aaKnown RBP8.72□□□□□ -1.01
VRK2-203ENST00000417641 GIGYF2Q6Y7W6 1299 aaKnown RBP8.72□□□□□ -1.01
VRK2-203ENST00000417641 CSGALNACT2Q8N6G5 542 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 BAP1Q92560 729 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 ESR2Q92731 530 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 CCSER1Q9C0I3 900 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 NFS1Q9Y697 457 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 TMCO5BA8MYB1 307 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 H0YHG0 523 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 RBAK-RBAKDNI3L0D1 243 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 M0R2N6 131 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 CLGNO14967 610 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 ECHS1P30084 290 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 MRPL12P52815 198 aaKnown RBP8.72□□□□□ -1.01
VRK2-203ENST00000417641 PAK2Q13177 524 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 TLDC1Q6P9B6 456 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 MIEF2Q96C03 454 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 CYFIP2Q96F07 1278 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 MS4A14Q96JA4 679 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 OSBPL7Q9BZF2 842 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 ACTR5Q9H9F9 607 aaPredicted RBP8.72□□□□□ -1.01
VRK2-203ENST00000417641 SLC12A6Q9UHW9 1150 aa8.72□□□□□ -1.01
VRK2-203ENST00000417641 DLEC1Q9Y238 1755 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 C1orf167Q5SNV9 1468 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 FAM205AQ6ZU69 1335 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 DUOX1Q9NRD9 1551 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 DNM1LO00429 736 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 CALM1P0DP23 149 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 CALM2P0DP24 149 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 CALM3P0DP25 149 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 CSB-PGBD3P0DP91 1061 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 PAFAH1B1P43034 410 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 STK4Q13043 487 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 IFT88Q13099 833 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 CDC37Q16543 378 aaPredicted RBP8.71□□□□□ -1.01
VRK2-203ENST00000417641 LACTB2Q53H82 288 aaPredicted RBP8.71□□□□□ -1.01
VRK2-203ENST00000417641 HGSNATQ68CP4 663 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 TYW1BQ6NUM6 668 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 LRIG3Q6UXM1 1119 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 CATIPQ7Z7H3 387 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 FUKQ8N0W3 1084 aa8.71□□□□□ -1.01
VRK2-203ENST00000417641 RNF10Q8N5U6 811 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms