RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 DRC1Q96MC2 740 aa16.17■□□□□ 0.18
HDAC9-208ENST00000417496 RTCBQ9Y3I0 505 aaKnown RBP16.17■□□□□ 0.18
HDAC9-208ENST00000417496 PDE2AO00408 941 aaPredicted RBP16.17■□□□□ 0.18
HDAC9-208ENST00000417496 LAD1O00515 517 aa16.17■□□□□ 0.18
HDAC9-208ENST00000417496 MYL1P05976 194 aa16.17■□□□□ 0.18
HDAC9-208ENST00000417496 TEX11Q8IYF3 940 aa16.17■□□□□ 0.18
HDAC9-208ENST00000417496 GLIS3Q8NEA6 775 aa16.17■□□□□ 0.18
HDAC9-208ENST00000417496 RRP36Q96EU6 259 aaKnown RBP16.17■□□□□ 0.18
HDAC9-208ENST00000417496 ZFP91Q96JP5 570 aaPredicted RBP16.17■□□□□ 0.18
HDAC9-208ENST00000417496 C6orf50Q9HD87 102 aa16.17■□□□□ 0.18
HDAC9-208ENST00000417496 JADE2Q9NQC1 790 aa16.17■□□□□ 0.18
HDAC9-208ENST00000417496 ZNHIT6Q9NWK9 470 aaKnown RBP16.17■□□□□ 0.18
HDAC9-208ENST00000417496 EP400Q96L91 3159 aa16.17■□□□□ 0.18
HDAC9-208ENST00000417496 PPP4CP60510 307 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 KRT83P78385 493 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 MRPS25P82663 173 aaKnown RBP16.16■□□□□ 0.18
HDAC9-208ENST00000417496 GPS2Q13227 327 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 KRT25Q7Z3Z0 450 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 TXLNBQ8N3L3 684 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 C7orf25Q9BPX7 421 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 NUDT12Q9BQG2 462 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 SPZ1Q9BXG8 430 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 LRWD1Q9UFC0 647 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 SEC63Q9UGP8 760 aaKnown RBP16.16■□□□□ 0.18
HDAC9-208ENST00000417496 CCNL1Q9UK58 526 aaPredicted RBP16.16■□□□□ 0.18
HDAC9-208ENST00000417496 LAMB1P07942 1786 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 ROBO3Q96MS0 1386 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 POTEMA6NI47 508 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 MYMKA6NI61 221 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 KRT86O43790 486 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 SLC37A4O43826 429 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 TDP2O95551 362 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 GPSM2P81274 684 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 ZBED6P86452 979 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 SOGA3Q5TF21 947 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 TMED8Q6PL24 325 aaPredicted RBP16.16■□□□□ 0.18
HDAC9-208ENST00000417496 AK8Q96MA6 479 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 CASZ1Q86V15 1759 aa16.16■□□□□ 0.18
HDAC9-208ENST00000417496 GNA11P29992 359 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 USP14P54578 494 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 GSTO1P78417 241 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 GRAPQ13588 217 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 LRRC41Q15345 812 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 ZSCAN26Q16670 478 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 PAPD7Q5XG87 772 aaKnown RBP16.15■□□□□ 0.18
HDAC9-208ENST00000417496 C2CD5Q86YS7 1000 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 REXO1Q8N1G1 1221 aaKnown RBP16.15■□□□□ 0.18
HDAC9-208ENST00000417496 CCDC155Q8N6L0 562 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 GRAPLQ8TC17 118 aaPredicted RBP16.15■□□□□ 0.18
HDAC9-208ENST00000417496 PSMB7Q99436 277 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 BLOC1S4Q9NUP1 217 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 BICDL2A1A5D9 508 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 EDIL3O43854 480 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 IDEP14735 1019 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 CYLC1P35663 651 aaPredicted RBP16.15■□□□□ 0.18
HDAC9-208ENST00000417496 GRB10Q13322 594 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 C16orf86Q6ZW13 317 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 ZNF804AQ7Z570 1209 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 LRRC47Q8N1G4 583 aaKnown RBP16.15■□□□□ 0.18
HDAC9-208ENST00000417496 EXOC4Q96A65 974 aa16.15■□□□□ 0.18
HDAC9-208ENST00000417496 COL5A3P25940 1745 aaPredicted RBP16.15■□□□□ 0.18
HDAC9-208ENST00000417496 IPO7O95373 1038 aaKnown RBP16.14■□□□□ 0.17
HDAC9-208ENST00000417496 MYBL2P10244 700 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 TNNT3P45378 269 aaPredicted RBP16.14■□□□□ 0.17
HDAC9-208ENST00000417496 CCDC96Q2M329 555 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 NEDD1Q8NHV4 660 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 CAGE1Q8TC20 777 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 RIN2Q8WYP3 895 aaPredicted RBP16.14■□□□□ 0.17
HDAC9-208ENST00000417496 CCDC42Q96M95 316 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 CD209Q9NNX6 404 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 LEMD3Q9Y2U8 911 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 EIF3JO75822 258 aaKnown RBP16.14■□□□□ 0.17
HDAC9-208ENST00000417496 UFL1O94874 794 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 RFC4P35249 363 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 C2orf54Q08AI8 447 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 WDR93Q6P2C0 686 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 KCNK18Q7Z418 384 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 ANKRD13CQ8N6S4 541 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 SNED1Q8TER0 1413 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 NOC3LQ8WTT2 800 aaKnown RBP16.14■□□□□ 0.17
HDAC9-208ENST00000417496 CCDC47Q96A33 483 aaKnown RBP16.14■□□□□ 0.17
HDAC9-208ENST00000417496 CALML4Q96GE6 196 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 PNMA5Q96PV4 448 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 LZTS2Q9BRK4 669 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 CUEDC2Q9H467 287 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 MMRN2Q9H8L6 949 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 MLXIPQ9HAP2 919 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 ARHGAP20Q9P2F6 1191 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 CAPN6Q9Y6Q1 641 aa16.14■□□□□ 0.17
HDAC9-208ENST00000417496 EIF3CLB5ME19 914 aaKnown RBP16.13■□□□□ 0.17
HDAC9-208ENST00000417496 TUBB4BP68371 445 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
HDAC9-208ENST00000417496 PICALMQ13492 652 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 CALCRLQ16602 461 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.13■□□□□ 0.17
HDAC9-208ENST00000417496 SV2BQ7L1I2 683 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 ZSCAN29Q8IWY8 852 aaPredicted RBP16.13■□□□□ 0.17
HDAC9-208ENST00000417496 C8orf37Q96NL8 207 aa16.13■□□□□ 0.17
HDAC9-208ENST00000417496 EIF3CQ99613 913 aaKnown RBP16.13■□□□□ 0.17
HDAC9-208ENST00000417496 NUP58Q9BVL2 599 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms