RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 TTC39BQ5VTQ0 682 aaPredicted RBP9.91□□□□□ -0.82
SP140-204ENST00000417495 MAGEC3Q8TD91 643 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 ATP6V0A4Q9HBG4 840 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 ITGB1BP2Q9UKP3 347 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 PALD1Q9ULE6 856 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 CCDC159P0C7I6 412 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 XRCC5P13010 732 aaKnown RBP9.91□□□□□ -0.82
SP140-204ENST00000417495 HDAC4P56524 1084 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 FMR1Q06787 632 aaKnown RBP eCLIP9.91□□□□□ -0.82
SP140-204ENST00000417495 NMIQ13287 307 aaPredicted RBP9.91□□□□□ -0.82
SP140-204ENST00000417495 DHX8Q14562 1220 aaKnown RBP9.91□□□□□ -0.82
SP140-204ENST00000417495 KCNB1Q14721 858 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 CCDC57Q2TAC2 916 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 DALRD3Q5D0E6 543 aaKnown RBP9.91□□□□□ -0.82
SP140-204ENST00000417495 SLC10A5Q5PT55 438 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 MCTP1Q6DN14 999 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 OLFML1Q6UWY5 402 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 RUFY3Q7L099 469 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 ZSCAN29Q8IWY8 852 aaPredicted RBP9.91□□□□□ -0.82
SP140-204ENST00000417495 VGLL2Q8N8G2 317 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 MARCH10Q8NA82 808 aaPredicted RBP9.91□□□□□ -0.82
SP140-204ENST00000417495 CUL5Q93034 780 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 PARD6BQ9BYG5 372 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 AGXT2Q9BYV1 514 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 UBAP1Q9NZ09 502 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 TMEM63CQ9P1W3 806 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 ZNF510Q9Y2H8 683 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 GPR182O15218 404 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 EIF2B5Q13144 721 aaKnown RBP9.9□□□□□ -0.82
SP140-204ENST00000417495 TKFCQ3LXA3 575 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 MTHFD1LQ6UB35 978 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 MIGA1Q8NAN2 632 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 TTLL11Q8NHH1 800 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 LMBR1Q8WVP7 490 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 C16orf45Q96MC5 204 aaPredicted RBP9.9□□□□□ -0.82
SP140-204ENST00000417495 CORO1BQ9BR76 489 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 PCDHGC5Q9Y5F6 944 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 CYP46A1Q9Y6A2 500 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 TRIM64CA6NLI5 447 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 ENO4A6NNW6 628 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 ATP5J2-PTCD1G3V325 749 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 PTCD1O75127 700 aaKnown RBP9.9□□□□□ -0.82
SP140-204ENST00000417495 BBOX1O75936 387 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 UQCRFS1P1P0C7P4 283 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 USP11P51784 963 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 PDE4BQ07343 736 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 NAA25Q14CX7 972 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 TTF1Q15361 905 aaPredicted RBP9.9□□□□□ -0.82
SP140-204ENST00000417495 FBXW10Q5XX13 1052 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 CREB3L3Q68CJ9 461 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 ZSCAN25Q6NSZ9 544 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 UBE2Q1Q7Z7E8 422 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 ARMC5Q96C12 935 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 SH3GL1Q99961 368 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 GINM1Q9NU53 330 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 FANCLQ9NW38 375 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 ZNF652Q9Y2D9 606 aa9.9□□□□□ -0.82
SP140-204ENST00000417495 WDR33Q9C0J8 1336 aaKnown RBP9.9□□□□□ -0.83
SP140-204ENST00000417495 TMEM221A6NGB7 291 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 CAMTA2O94983 1202 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 FERP16591 822 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 LMNB1P20700 586 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 SOX11P35716 441 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 PAPOLAP51003 745 aaKnown RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 C1QBPQ07021 282 aaKnown RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 NR1H3Q13133 447 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 IFIT5Q13325 482 aaKnown RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 FOXR1Q6PIV2 292 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 BRAPQ7Z569 592 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 SPATS2Q86XZ4 545 aaKnown RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 LRRC49Q8IUZ0 686 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 C1orf131Q8NDD1 294 aaKnown RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.89□□□□□ -0.83
SP140-204ENST00000417495 IL25Q9H293 177 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 C12orf49Q9H741 205 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 TUBA8Q9NY65 449 aaPredicted RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 RBM8AQ9Y5S9 174 aaKnown RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 RNF8O76064 485 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 TGFB3P10600 412 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 FGFR2P21802 821 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 EVCP57679 992 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 UBE4AQ14139 1066 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 TSHZ3Q63HK5 1081 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 TMC6Q7Z403 805 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 TMC4Q7Z404 712 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 DZIP1Q86YF9 867 aaKnown RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 GBP7Q8N8V2 638 aaPredicted RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 ANKK1Q8NFD2 765 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 FSD1Q9BTV5 496 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 SRA1Q9HD15 236 aaKnown RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 C4AP0C0L4 1744 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 C4BP0C0L5 1744 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 LOC102724428A0A0B4J2F2 783 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 M0R2C6 588 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 ENPP3O14638 875 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 EZRP15311 586 aaKnown RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 SIK1P57059 783 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 LLPHQ9BRT6 129 aaKnown RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 CCDC8Q9H0W5 538 aaPredicted RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 PAG1Q9NWQ8 432 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms