RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 TRIM14Q14142 442 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 ZNF268Q14587 947 aaPredicted RBP7.08□□□□□ -1.28
CCNT1-202ENST00000417344 RRS1Q15050 365 aaKnown RBP7.08□□□□□ -1.28
CCNT1-202ENST00000417344 PTPRNQ16849 979 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 AMOTQ4VCS5 1084 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 ZMYM1Q5SVZ6 1142 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 SPATA1Q5VX52 437 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 LYPD8Q6UX82 237 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 STOX1Q6ZVD7 989 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 ZNF572Q7Z3I7 529 aaPredicted RBP7.08□□□□□ -1.28
CCNT1-202ENST00000417344 MAATS1Q7Z4T9 603 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 FNBP4Q8N3X1 1017 aaPredicted RBP7.08□□□□□ -1.28
CCNT1-202ENST00000417344 AFAP1Q8N556 730 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 ANKRD24Q8TF21 1146 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 TEKT4Q8WW24 435 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 DTNBP1Q96EV8 351 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 FAM167BQ9BTA0 163 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 BOLA2Q9H3K6 86 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 JADE2Q9NQC1 790 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 PANK4Q9NVE7 773 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 SLC12A4Q9UP95 1085 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 COL15A1P39059 1388 aa7.08□□□□□ -1.28
CCNT1-202ENST00000417344 A0A1B0GVG6 124 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 DPPA5A6NC42 116 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 N4BP3O15049 544 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 KRT86O43790 486 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 TRIM37O94972 964 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 NPTXRO95502 500 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 IDEP14735 1019 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 CNGA1P29973 690 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 ALDH3A1P30838 453 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 KIF5BP33176 963 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 CD151P48509 253 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 MRPS25P82663 173 aaKnown RBP7.07□□□□□ -1.28
CCNT1-202ENST00000417344 MXRA7P84157 204 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 EXOSC10Q01780 885 aaKnown RBP7.07□□□□□ -1.28
CCNT1-202ENST00000417344 PAK2Q13177 524 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 PTPAQ15257 358 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 ANKRD20A2Q5SQ80 823 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 ANKRD20A1Q5TYW2 823 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 ANKRD20A3Q5VUR7 823 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 NUGGCQ68CJ6 796 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 HAUS3Q68CZ6 603 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 ZNF662Q6ZS27 426 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 CREG2Q8IUH2 290 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 MREGQ8N565 214 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 SPATA4Q8NEY3 305 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 BICD1Q96G01 975 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 ANKRD27Q96NW4 1050 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 CHP1Q99653 195 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 MOV10L1Q9BXT6 1211 aaKnown RBP7.07□□□□□ -1.28
CCNT1-202ENST00000417344 TRIM4Q9C037 500 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 ZCWPW1Q9H0M4 648 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 SH3TC1Q8TE82 1336 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 NCAPD2Q15021 1401 aa7.07□□□□□ -1.28
CCNT1-202ENST00000417344 GPR75-ASB3A0A0A6YYF3 556 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 CCT8L1PA6NM43 557 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 RNF225M0QZC1 329 aaPredicted RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 ABLIM1O14639 778 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 IFIT3O14879 490 aaKnown RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 MAFGO15525 162 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 MYL1P05976 194 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 KRT9P35527 623 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 CCNG1P51959 295 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 HERVK_113P62684 666 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 KRT83P78385 493 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 FKBP15Q5T1M5 1219 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 CDKAL1Q5VV42 579 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 TBC1D1Q86TI0 1168 aaPredicted RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 FAM160A2Q8N612 972 aaPredicted RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 NOC3LQ8WTT2 800 aaKnown RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 CDK19Q9BWU1 502 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 MMADHCQ9H3L0 296 aaPredicted RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 ANKIB1Q9P2G1 1089 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 WDR35Q9P2L0 1181 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 SLC12A6Q9UHW9 1150 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 C2CD2Q9Y426 696 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 ASB3Q9Y575 518 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 WDR17Q8IZU2 1322 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 CLTCQ00610 1675 aaKnown RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 MAP3K15Q6ZN16 1313 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 SYNRGQ9UMZ2 1314 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 TLL1O43897 1013 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 UPP2O95045 317 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 VIMP08670 466 aaKnown RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 PAEPP09466 180 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 MYBL1P10243 752 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 CDC25AP30304 524 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 MATR3P43243 847 aaKnown RBP eCLIP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 CTDSPL2Q05D32 466 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 DYNC1I2Q13409 638 aaKnown RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 SETDB1Q15047 1291 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 CDC37Q16543 378 aaPredicted RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 DBN1Q16643 649 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 CCDC178Q5BJE1 867 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 TTC39AQ5SRH9 613 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 ACBD5Q5T8D3 534 aaPredicted RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 CPLX4Q7Z7G2 160 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 NME9Q86XW9 330 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms