RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 PTPDC1A2A3K4 754 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 KIAA0355O15063 1070 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 SGSM2O43147 1006 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 CALML3P27482 149 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 CDK7P50613 346 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 COL9A3Q14050 684 aaPredicted RBP17.69■□□□□ 0.42
UBXN4-203ENST00000416538 SHHQ15465 462 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 GNASQ5JWF2 1037 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 STAG2Q8N3U4 1231 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 KRT23Q9C075 422 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 TBX21Q9UL17 535 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 COL6A3P12111 3177 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 SCN5AQ14524 2016 aa17.69■□□□□ 0.42
UBXN4-203ENST00000416538 NT5C2P49902 561 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 QRICH1Q2TAL8 776 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 ASPRV1Q53RT3 343 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 CXCL17Q6UXB2 119 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 RNF207Q6ZRF8 634 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 ADGRF4Q8IZF3 695 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 NUP133Q8WUM0 1156 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 TBC1D5Q92609 795 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 TANC1Q9C0D5 1861 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 CNNM2Q9H8M5 875 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 VTA1Q9NP79 307 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 COL20A1Q9P218 1284 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 GRIN2DO15399 1336 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 ELP1O95163 1332 aa17.68■□□□□ 0.42
UBXN4-203ENST00000416538 EDNRBP24530 442 aa17.67■□□□□ 0.42
UBXN4-203ENST00000416538 ANTXR2P58335 489 aa17.67■□□□□ 0.42
UBXN4-203ENST00000416538 FAM126BQ8IXS8 530 aa17.67■□□□□ 0.42
UBXN4-203ENST00000416538 PCSK9Q8NBP7 692 aaKnown RBP17.67■□□□□ 0.42
UBXN4-203ENST00000416538 GLT1D1Q96MS3 346 aa17.67■□□□□ 0.42
UBXN4-203ENST00000416538 TOX2Q96NM4 488 aa17.67■□□□□ 0.42
UBXN4-203ENST00000416538 UBAC1Q9BSL1 405 aa17.67■□□□□ 0.42
UBXN4-203ENST00000416538 JMJD4Q9H9V9 463 aa17.67■□□□□ 0.42
UBXN4-203ENST00000416538 DOCK5Q9H7D0 1870 aa17.67■□□□□ 0.42
UBXN4-203ENST00000416538 OPLAHO14841 1288 aa17.66■□□□□ 0.42
UBXN4-203ENST00000416538 DYNC1LI2O43237 492 aaPredicted RBP17.66■□□□□ 0.42
UBXN4-203ENST00000416538 PPP1R11O60927 126 aaPredicted RBP17.66■□□□□ 0.42
UBXN4-203ENST00000416538 PARP1P09874 1014 aaKnown RBP17.66■□□□□ 0.42
UBXN4-203ENST00000416538 FSCN1Q16658 493 aaKnown RBP17.66■□□□□ 0.42
UBXN4-203ENST00000416538 CCDC178Q5BJE1 867 aa17.66■□□□□ 0.42
UBXN4-203ENST00000416538 IFIT1BQ5T764 474 aaKnown RBP17.66■□□□□ 0.42
UBXN4-203ENST00000416538 GPR153Q6NV75 609 aa17.66■□□□□ 0.42
UBXN4-203ENST00000416538 NOL8Q76FK4 1167 aaKnown RBP17.66■□□□□ 0.42
UBXN4-203ENST00000416538 SPC25Q9HBM1 224 aa17.66■□□□□ 0.42
UBXN4-203ENST00000416538 ADD3Q9UEY8 706 aaKnown RBP17.66■□□□□ 0.42
UBXN4-203ENST00000416538 A0A0U1RQG5 324 aaPredicted RBP17.65■□□□□ 0.42
UBXN4-203ENST00000416538 RBM47A0AV96 593 aaKnown RBP17.65■□□□□ 0.42
UBXN4-203ENST00000416538 ARVCFO00192 962 aa17.65■□□□□ 0.42
UBXN4-203ENST00000416538 IQSEC1Q6DN90 963 aa17.65■□□□□ 0.42
UBXN4-203ENST00000416538 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
UBXN4-203ENST00000416538 DEFB123Q8N688 67 aa17.65■□□□□ 0.42
UBXN4-203ENST00000416538 SLC43A3Q8NBI5 491 aa17.65■□□□□ 0.42
UBXN4-203ENST00000416538 TMEM39AQ9NV64 488 aa17.65■□□□□ 0.42
UBXN4-203ENST00000416538 MAD2L2Q9UI95 211 aa17.65■□□□□ 0.42
UBXN4-203ENST00000416538 LOC102724159A0A0B4J2E5 919 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 E7EWF7 191 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 ARIH2O95376 493 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 CD4P01730 458 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 RAG1P15918 1043 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 PSMC6P62333 389 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 PWP2Q15269 919 aaKnown RBP17.64■□□□□ 0.41
UBXN4-203ENST00000416538 DUSP28Q4G0W2 176 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 CHST3Q7LGC8 479 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 MB21D2Q8IYB1 491 aaPredicted RBP17.64■□□□□ 0.41
UBXN4-203ENST00000416538 SYTL5Q8TDW5 730 aaPredicted RBP17.64■□□□□ 0.41
UBXN4-203ENST00000416538 RUFY2Q8WXA3 655 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 COPS5Q92905 334 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 MTMR8Q96EF0 704 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 MTMR10Q9NXD2 777 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 RBM8AQ9Y5S9 174 aaKnown RBP17.64■□□□□ 0.41
UBXN4-203ENST00000416538 CDH23Q9H251 3354 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 ABCB11O95342 1321 aa17.64■□□□□ 0.41
UBXN4-203ENST00000416538 TRIP12Q14669 1992 aaPredicted RBP17.63■□□□□ 0.41
UBXN4-203ENST00000416538 PALM3A6NDB9 673 aaPredicted RBP17.63■□□□□ 0.41
UBXN4-203ENST00000416538 DCDC2CA8MYV0 355 aa17.63■□□□□ 0.41
UBXN4-203ENST00000416538 MAP4K1Q92918 833 aa17.63■□□□□ 0.41
UBXN4-203ENST00000416538 TAAR1Q96RJ0 339 aa17.63■□□□□ 0.41
UBXN4-203ENST00000416538 WDR11Q9BZH6 1224 aa17.63■□□□□ 0.41
UBXN4-203ENST00000416538 AP5M1Q9H0R1 490 aa17.63■□□□□ 0.41
UBXN4-203ENST00000416538 VAT1LQ9HCJ6 419 aa17.63■□□□□ 0.41
UBXN4-203ENST00000416538 GPHNQ9NQX3 736 aaPredicted RBP17.63■□□□□ 0.41
UBXN4-203ENST00000416538 PNMA2Q9UL42 364 aa17.63■□□□□ 0.41
UBXN4-203ENST00000416538 Q9Y3F1 56 aa17.63■□□□□ 0.41
UBXN4-203ENST00000416538 UMODL1Q5DID0 1318 aa17.63■□□□□ 0.41
UBXN4-203ENST00000416538 CYTH3O43739 400 aa17.62■□□□□ 0.41
UBXN4-203ENST00000416538 DHX16O60231 1041 aaKnown RBP17.62■□□□□ 0.41
UBXN4-203ENST00000416538 GRM4Q14833 912 aa17.62■□□□□ 0.41
UBXN4-203ENST00000416538 DNERQ8NFT8 737 aa17.62■□□□□ 0.41
UBXN4-203ENST00000416538 PPP1R13LQ8WUF5 828 aa17.62■□□□□ 0.41
UBXN4-203ENST00000416538 VTI1AQ96AJ9 217 aa17.62■□□□□ 0.41
UBXN4-203ENST00000416538 GUCD1Q96NT3 240 aa17.62■□□□□ 0.41
UBXN4-203ENST00000416538 PPP1R12CQ9BZL4 782 aa17.62■□□□□ 0.41
UBXN4-203ENST00000416538 LSG1Q9H089 658 aaKnown RBP17.62■□□□□ 0.41
UBXN4-203ENST00000416538 MROH7Q68CQ1 1323 aa17.62■□□□□ 0.41
UBXN4-203ENST00000416538 TET1Q8NFU7 2136 aa17.62■□□□□ 0.41
UBXN4-203ENST00000416538 PTPRSQ13332 1948 aa17.61■□□□□ 0.41
UBXN4-203ENST00000416538 KLRF2D3W0D1 207 aa17.61■□□□□ 0.41
UBXN4-203ENST00000416538 TIMP1P01033 207 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms