RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 KIF5BP33176 963 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 PKN1Q16512 942 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 ANKLE1Q8NAG6 615 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 FBXO18Q8NFZ0 1043 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 DPF3Q92784 378 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 TEX13BQ9BXU2 312 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 FBXO40Q9UH90 709 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 V9GY48 417 aaPredicted RBP10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 RLFQ13129 1914 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 ZNFX1Q9P2E3 1918 aaKnown RBP10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 CYTH3O43739 400 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 PDHBP11177 359 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 CCDC96Q2M329 555 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 KIAA1755Q5JYT7 1200 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 RIOX2Q8IUF8 465 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 TRIM22Q8IYM9 498 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 PIBF1Q8WXW3 757 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 GMCL1Q96IK5 515 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 RNF26Q9BY78 433 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 RRAGDQ9NQL2 400 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 PAK6Q9NQU5 681 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 FRMPD2Q68DX3 1309 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 KIF28PB7ZC32 967 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 TMEM232C9JQI7 657 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 PRPF3O43395 683 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 DEXIO95424 95 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 HOXC6P09630 235 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 SNHG28P0DPA3 235 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 PDIA4P13667 645 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 OAZ1P54368 228 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 DNM1Q05193 864 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 TMEM132BQ14DG7 1078 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 KRT40Q6A162 431 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 SNRNP48Q6IEG0 339 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 NECAB2Q7Z6G3 386 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 CPXCR1Q8N123 301 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 USP6NLQ92738 828 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 NUP88Q99567 741 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 GDPD2Q9HCC8 539 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 FBXO28Q9NVF7 368 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 ADAMTS5Q9UNA0 930 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 CNPY2Q9Y2B0 182 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 NR2E3Q9Y5X4 410 aa10.61□□□□□ -0.71
CHRNA1-206ENST00000416004 PLXNA1Q9UIW2 1896 aa10.6□□□□□ -0.71
CHRNA1-206ENST00000416004 KLRF2D3W0D1 207 aa10.6□□□□□ -0.71
CHRNA1-206ENST00000416004 PARP1P09874 1014 aaKnown RBP10.6□□□□□ -0.71
CHRNA1-206ENST00000416004 OLFML2BQ68BL8 750 aa10.6□□□□□ -0.71
CHRNA1-206ENST00000416004 DCAF4Q8WV16 495 aa10.6□□□□□ -0.71
CHRNA1-206ENST00000416004 PNMA2Q9UL42 364 aa10.6□□□□□ -0.71
CHRNA1-206ENST00000416004 KCNJ14Q9UNX9 436 aa10.6□□□□□ -0.71
CHRNA1-206ENST00000416004 CACNB2Q08289 660 aaPredicted RBP10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 ANKRD35Q8N283 1001 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 GPCPD1Q9NPB8 672 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 VPS54Q9P1Q0 977 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 PDE4DIPQ5VU43 2346 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 DDX11L8A8MPP1 907 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 ATP2A1O14983 1001 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 GNAQP50148 359 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 AKAP17AQ02040 695 aaKnown RBP10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 ZNF543Q08ER8 600 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 CCL14Q16627 93 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 TKFCQ3LXA3 575 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 TTBK2Q6IQ55 1244 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 CHST13Q8NET6 341 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 WASF1Q92558 559 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 UBA5Q9GZZ9 404 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 LMBRD1Q9NUN5 540 aa10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 DIS3Q9Y2L1 958 aaKnown RBP10.59□□□□□ -0.71
CHRNA1-206ENST00000416004 PLA2G6O60733 806 aa10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 PRPF40AO75400 957 aaKnown RBP10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 SCG2P13521 617 aa10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 TRIM32Q13049 653 aa10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 PFKFB3Q16875 520 aaPredicted RBP10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 ASPRV1Q53RT3 343 aa10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 MAP3K21Q5TCX8 1036 aa10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 POTEEQ6S8J3 1075 aa10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 KCTD1Q719H9 257 aa10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 SPZ1Q9BXG8 430 aa10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 FTOQ9C0B1 505 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 CRISPLD2Q9H0B8 497 aa10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 ZSCAN16Q9H4T2 348 aaPredicted RBP10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 SLC38A10Q9HBR0 1119 aa10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 RAVER2Q9HCJ3 691 aaKnown RBP10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 TFIP11Q9UBB9 837 aaKnown RBP10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 ZNF214Q9UL59 606 aaPredicted RBP10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 ATP6V1DQ9Y5K8 247 aa10.58□□□□□ -0.72
CHRNA1-206ENST00000416004 ADAMTS3O15072 1205 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 FIBPO43427 364 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 EVI5O60447 810 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 MMP1P03956 469 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 NCLP19338 710 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 SLC16A2P36021 539 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 TRIM29Q14134 588 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 NPY5RQ15761 445 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 TYW1BQ6NUM6 668 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 MSL3Q8N5Y2 521 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 ARRDC4Q8NCT1 418 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 RGS22Q8NE09 1264 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 NPLOC4Q8TAT6 608 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms