RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 UBA5Q9GZZ9 404 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 HOXC10Q9NYD6 342 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 FEM1BQ9UK73 627 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 CCDC196A0A1B0GTZ2 297 aa15.77■□□□□ 0.12
CPNE1-209ENST00000415920 PALM3A6NDB9 673 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-209ENST00000415920 PFKFB2O60825 505 aa15.77■□□□□ 0.12
CPNE1-209ENST00000415920 TMEM132BQ14DG7 1078 aa15.77■□□□□ 0.12
CPNE1-209ENST00000415920 SHHQ15465 462 aa15.77■□□□□ 0.12
CPNE1-209ENST00000415920 SYDE2Q5VT97 1194 aa15.77■□□□□ 0.12
CPNE1-209ENST00000415920 HOMER1Q86YM7 354 aa15.77■□□□□ 0.12
CPNE1-209ENST00000415920 CCDC82Q8N4S0 544 aa15.77■□□□□ 0.12
CPNE1-209ENST00000415920 PIBF1Q8WXW3 757 aa15.77■□□□□ 0.12
CPNE1-209ENST00000415920 TMX3Q96JJ7 454 aa15.77■□□□□ 0.12
CPNE1-209ENST00000415920 MAML3Q96JK9 1138 aa15.77■□□□□ 0.12
CPNE1-209ENST00000415920 PRDM5Q9NQX1 630 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-209ENST00000415920 PLXNA1Q9UIW2 1896 aa15.77■□□□□ 0.11
CPNE1-209ENST00000415920 TRIM43BA6NCK2 446 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 SEPT4O43236 478 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 STRNO43815 780 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 PPFIA3O75145 1194 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 PGK2P07205 417 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 ADD1P35611 737 aaKnown RBP15.76■□□□□ 0.11
CPNE1-209ENST00000415920 ADCYAP1R1P41586 468 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 GNAQP50148 359 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 ST3GAL1Q11201 340 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 SNX17Q15036 470 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 CPLX2Q6PUV4 134 aaKnown RBP15.76■□□□□ 0.11
CPNE1-209ENST00000415920 CHURC1Q8WUH1 139 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 BADQ92934 168 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 SNX21Q969T3 373 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 TRIM43Q96BQ3 446 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-209ENST00000415920 LENG1Q96BZ8 264 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-209ENST00000415920 PDLIM7Q9NR12 457 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 PPP1R9AQ9ULJ8 1098 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 PRR12Q9ULL5 1215 aa15.76■□□□□ 0.11
CPNE1-209ENST00000415920 LAMA2P24043 3122 aaKnown RBP15.76■□□□□ 0.11
CPNE1-209ENST00000415920 UNC80Q8N2C7 3258 aa15.75■□□□□ 0.11
CPNE1-209ENST00000415920 LCTP09848 1927 aa15.75■□□□□ 0.11
CPNE1-209ENST00000415920 MYH15Q9Y2K3 1946 aa15.75■□□□□ 0.11
CPNE1-209ENST00000415920 CDKL5O76039 1030 aa15.75■□□□□ 0.11
CPNE1-209ENST00000415920 TAL1P17542 331 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-209ENST00000415920 ITGB8P26012 769 aa15.75■□□□□ 0.11
CPNE1-209ENST00000415920 SNAP25P60880 206 aa15.75■□□□□ 0.11
CPNE1-209ENST00000415920 PPP2R5BQ15173 497 aa15.75■□□□□ 0.11
CPNE1-209ENST00000415920 LRRC41Q15345 812 aa15.75■□□□□ 0.11
CPNE1-209ENST00000415920 CDC37Q16543 378 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-209ENST00000415920 SRBD1Q8N5C6 995 aaKnown RBP15.75■□□□□ 0.11
CPNE1-209ENST00000415920 ARRDC4Q8NCT1 418 aa15.75■□□□□ 0.11
CPNE1-209ENST00000415920 COL25A1Q9BXS0 654 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-209ENST00000415920 MROH8Q9H579 483 aa15.75■□□□□ 0.11
CPNE1-209ENST00000415920 VAT1LQ9HCJ6 419 aa15.75■□□□□ 0.11
CPNE1-209ENST00000415920 FAM217BQ9NTX9 383 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-209ENST00000415920 CTDP1Q9Y5B0 961 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-209ENST00000415920 PTPDC1A2A3K4 754 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 KBTBD13C9JR72 458 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 DTNBO60941 627 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 BECN1Q14457 450 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 FAM109BQ6ICB4 259 aaPredicted RBP15.74■□□□□ 0.11
CPNE1-209ENST00000415920 CCDC174Q6PII3 467 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 ADGRF4Q8IZF3 695 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 MB21D1Q8N884 522 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 PHKBQ93100 1093 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 LZTS2Q9BRK4 669 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 SPZ1Q9BXG8 430 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 SLC26A6Q9BXS9 759 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 PRKAG2Q9UGJ0 569 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 SEC63Q9UGP8 760 aaKnown RBP15.74■□□□□ 0.11
CPNE1-209ENST00000415920 ADAMTS5Q9UNA0 930 aa15.74■□□□□ 0.11
CPNE1-209ENST00000415920 hCG_1642624A0A1W2PR95 340 aa15.73■□□□□ 0.11
CPNE1-209ENST00000415920 CYTH3O43739 400 aa15.73■□□□□ 0.11
CPNE1-209ENST00000415920 HSP90AA1P07900 732 aaKnown RBP15.73■□□□□ 0.11
CPNE1-209ENST00000415920 EPHB4P54760 987 aa15.73■□□□□ 0.11
CPNE1-209ENST00000415920 AKAP17AQ02040 695 aaKnown RBP15.73■□□□□ 0.11
CPNE1-209ENST00000415920 SLC35G1Q2M3R5 365 aa15.73■□□□□ 0.11
CPNE1-209ENST00000415920 BTNL9Q6UXG8 535 aa15.73■□□□□ 0.11
CPNE1-209ENST00000415920 TRIM22Q8IYM9 498 aa15.73■□□□□ 0.11
CPNE1-209ENST00000415920 ABRAQ8N0Z2 381 aa15.73■□□□□ 0.11
CPNE1-209ENST00000415920 PRPF38AQ8NAV1 312 aaKnown RBP15.73■□□□□ 0.11
CPNE1-209ENST00000415920 REPS2Q8NFH8 660 aa15.73■□□□□ 0.11
CPNE1-209ENST00000415920 RRP36Q96EU6 259 aaKnown RBP15.73■□□□□ 0.11
CPNE1-209ENST00000415920 JAK2O60674 1132 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 PLA2G6O60733 806 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 PGK1P00558 417 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 FCER1AP12319 257 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 IFNAR1P17181 557 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 TLE2Q04725 743 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 QRICH1Q2TAL8 776 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.72■□□□□ 0.11
CPNE1-209ENST00000415920 NSUN7Q8NE18 718 aaKnown RBP15.72■□□□□ 0.11
CPNE1-209ENST00000415920 DDX11Q96FC9 970 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 PIGSQ96S52 555 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 MMP19Q99542 508 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 CDX2Q99626 313 aaPredicted RBP15.72■□□□□ 0.11
CPNE1-209ENST00000415920 TTYH1Q9H313 450 aaPredicted RBP15.72■□□□□ 0.11
CPNE1-209ENST00000415920 JMJD4Q9H9V9 463 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 FOXD4L1Q9NU39 408 aa15.72■□□□□ 0.11
CPNE1-209ENST00000415920 ZNF214Q9UL59 606 aaPredicted RBP15.72■□□□□ 0.11
CPNE1-209ENST00000415920 STK36Q9NRP7 1315 aa15.71■□□□□ 0.11
CPNE1-209ENST00000415920 VWA5AO00534 786 aa15.71■□□□□ 0.11
CPNE1-209ENST00000415920 ZBED4O75132 1171 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms