RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 RIPK3Q9Y572 518 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 STXBP3O00186 592 aa16.64■□□□□ 0.25
SGCE-202ENST00000415788 NAPAP54920 295 aa16.64■□□□□ 0.25
SGCE-202ENST00000415788 LACTBP83111 547 aaPredicted RBP16.64■□□□□ 0.25
SGCE-202ENST00000415788 KIF22Q14807 665 aa16.64■□□□□ 0.25
SGCE-202ENST00000415788 GPKOWQ92917 476 aaPredicted RBP eCLIP16.64■□□□□ 0.25
SGCE-202ENST00000415788 COA7Q96BR5 231 aa16.64■□□□□ 0.25
SGCE-202ENST00000415788 GLT8D2Q9H1C3 349 aa16.64■□□□□ 0.25
SGCE-202ENST00000415788 PORCNQ9H237 461 aa16.64■□□□□ 0.25
SGCE-202ENST00000415788 EFCC1Q9HA90 598 aa16.64■□□□□ 0.25
SGCE-202ENST00000415788 HOMER2Q9NSB8 354 aa16.64■□□□□ 0.25
SGCE-202ENST00000415788 ESYT2A0FGR8 921 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 STRNO43815 780 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 FKTNO75072 461 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 FCGRTP55899 365 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 ABRAQ8N0Z2 381 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 RGS22Q8NE09 1264 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 ALG1Q9BT22 464 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 MAP3K20Q9NYL2 800 aaKnown RBP16.63■□□□□ 0.25
SGCE-202ENST00000415788 IVNS1ABPQ9Y6Y0 642 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 UQCRHLA0A096LP55 91 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 UQCRHP07919 91 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 ARHGEF6Q15052 776 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 WDR78Q5VTH9 848 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 SASS6Q6UVJ0 657 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 CLEC4DQ8WXI8 215 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 SYAP1Q96A49 352 aaPredicted RBP16.63■□□□□ 0.25
SGCE-202ENST00000415788 ERO1AQ96HE7 468 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 ZDHHC9Q9Y397 364 aa16.63■□□□□ 0.25
SGCE-202ENST00000415788 COL11A1P12107 1806 aaPredicted RBP16.62■□□□□ 0.25
SGCE-202ENST00000415788 PFASO15067 1338 aa16.62■□□□□ 0.25
SGCE-202ENST00000415788 FCER1AP12319 257 aa16.62■□□□□ 0.25
SGCE-202ENST00000415788 GJB2P29033 226 aa16.62■□□□□ 0.25
SGCE-202ENST00000415788 KCTD2Q14681 263 aa16.62■□□□□ 0.25
SGCE-202ENST00000415788 GPR142Q7Z601 462 aa16.62■□□□□ 0.25
SGCE-202ENST00000415788 PLEKHH3Q7Z736 793 aa16.62■□□□□ 0.25
SGCE-202ENST00000415788 BAZ2BQ9UIF8 2168 aaKnown RBP16.61■□□□□ 0.25
SGCE-202ENST00000415788 NFIBO00712 420 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 TNPO2O14787 897 aaKnown RBP16.61■□□□□ 0.25
SGCE-202ENST00000415788 GNRH1P01148 92 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 GNA11P29992 359 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 GHRHRQ02643 423 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 PKP1Q13835 747 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 TRIM29Q14134 588 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 MUM1L1Q5H9M0 696 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 GALNT17Q6IS24 598 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 ZNF296Q8WUU4 475 aaPredicted RBP16.61■□□□□ 0.25
SGCE-202ENST00000415788 ZMYND12Q9H0C1 365 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 PSTPIP2Q9H939 334 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 C6orf50Q9HD87 102 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 VPS54Q9P1Q0 977 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 TAL1P17542 331 aaPredicted RBP16.61■□□□□ 0.25
SGCE-202ENST00000415788 CALML3P27482 149 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 MRPL12P52815 198 aaKnown RBP16.61■□□□□ 0.25
SGCE-202ENST00000415788 TYW1BQ6NUM6 668 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 ANKRD35Q8N283 1001 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 SOCS4Q8WXH5 440 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 CUL5Q93034 780 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 AIFM3Q96NN9 605 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 MMP19Q99542 508 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 TMEM63CQ9P1W3 806 aa16.61■□□□□ 0.25
SGCE-202ENST00000415788 SMCO2A6NFE2 343 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 SLC15A5A6NIM6 579 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 PIK3CDO00329 1044 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 HSPA1AP0DMV8 641 aaKnown RBP16.6■□□□□ 0.25
SGCE-202ENST00000415788 HSPA1BP0DMV9 641 aaKnown RBP16.6■□□□□ 0.25
SGCE-202ENST00000415788 PDCP20941 246 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 PTPREP23469 700 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 PSMC4P43686 418 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 ADCY7P51828 1080 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 NLRP5P59047 1200 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 NSMFQ6X4W1 530 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 RNF207Q6ZRF8 634 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 BICD2Q8TD16 824 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 C8orf76Q96K31 380 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 RIC8AQ9NPQ8 531 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 A1CFQ9NQ94 594 aaKnown RBP16.6■□□□□ 0.25
SGCE-202ENST00000415788 TSKSQ9UJT2 592 aa16.6■□□□□ 0.25
SGCE-202ENST00000415788 GCOM1H8Y6P7 765 aaPredicted RBP16.59■□□□□ 0.25
SGCE-202ENST00000415788 OPLAHO14841 1288 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 DTNBO60941 627 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 POLR2MP0CAP2 368 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 CTCFP49711 727 aaPredicted RBP16.59■□□□□ 0.25
SGCE-202ENST00000415788 HSD17B4P51659 736 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 GRB14Q14449 540 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 MCTP2Q6DN12 878 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 PHF20Q9BVI0 1012 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 CYP39A1Q9NYL5 469 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 SYCE3A1L190 88 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 BRD1O95696 1058 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 CFBP00751 764 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 PDIA4P13667 645 aaKnown RBP16.59■□□□□ 0.25
SGCE-202ENST00000415788 HOXD10P28358 340 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 DAGLBQ8NCG7 672 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 TRIM47Q96LD4 638 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 SLC5A4Q9NY91 659 aa16.59■□□□□ 0.25
SGCE-202ENST00000415788 RPS6P62753 249 aaKnown RBP16.58■□□□□ 0.24
SGCE-202ENST00000415788 UVSSAQ2YD98 709 aa16.58■□□□□ 0.24
SGCE-202ENST00000415788 FBXO18Q8NFZ0 1043 aa16.58■□□□□ 0.24
SGCE-202ENST00000415788 CD99L2Q8TCZ2 262 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms