RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 SNAP25P60880 206 aa19.5■□□□□ 0.71
CDC42EP1-202ENST00000415670 PPARAQ07869 468 aa19.5■□□□□ 0.71
CDC42EP1-202ENST00000415670 PSRC1Q6PGN9 363 aaPredicted RBP19.5■□□□□ 0.71
CDC42EP1-202ENST00000415670 SPRED2Q7Z698 418 aa19.5■□□□□ 0.71
CDC42EP1-202ENST00000415670 MSL3Q8N5Y2 521 aaKnown RBP19.5■□□□□ 0.71
CDC42EP1-202ENST00000415670 SLC43A3Q8NBI5 491 aa19.5■□□□□ 0.71
CDC42EP1-202ENST00000415670 PCSK9Q8NBP7 692 aaKnown RBP19.5■□□□□ 0.71
CDC42EP1-202ENST00000415670 PURBQ96QR8 312 aaKnown RBP19.5■□□□□ 0.71
CDC42EP1-202ENST00000415670 HIPK3Q9H422 1215 aa19.5■□□□□ 0.71
CDC42EP1-202ENST00000415670 CLIP2Q9UDT6 1046 aa19.5■□□□□ 0.71
CDC42EP1-202ENST00000415670 SCN5AQ14524 2016 aa19.49■□□□□ 0.71
CDC42EP1-202ENST00000415670 B4GALT4O60513 344 aa19.49■□□□□ 0.71
CDC42EP1-202ENST00000415670 HAND2P61296 217 aa19.49■□□□□ 0.71
CDC42EP1-202ENST00000415670 RAB30Q15771 203 aa19.49■□□□□ 0.71
CDC42EP1-202ENST00000415670 TSGA10IPQ3SY00 556 aa19.49■□□□□ 0.71
CDC42EP1-202ENST00000415670 ANKRD35Q8N283 1001 aa19.49■□□□□ 0.71
CDC42EP1-202ENST00000415670 NOC4LQ9BVI4 516 aaKnown RBP19.49■□□□□ 0.71
CDC42EP1-202ENST00000415670 ABHD16BQ9H3Z7 469 aa19.49■□□□□ 0.71
CDC42EP1-202ENST00000415670 MROH7Q68CQ1 1323 aa19.49■□□□□ 0.71
CDC42EP1-202ENST00000415670 TLR3O15455 904 aaKnown RBP19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 ANAPC15P60006 121 aa19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 ITGA7Q13683 1181 aa19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 TTLL4Q14679 1199 aa19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 NOL8Q76FK4 1167 aaKnown RBP19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 EEPD1Q7L9B9 569 aa19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 ZNF467Q7Z7K2 595 aaPredicted RBP19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 RASEFQ8IZ41 740 aa19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 PRPF38AQ8NAV1 312 aaKnown RBP19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 IL17RAQ96F46 866 aa19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 GNEQ9Y223 722 aaKnown RBP19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 SNX14Q9Y5W7 946 aa19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 MYH4Q9Y623 1939 aa19.48■□□□□ 0.71
CDC42EP1-202ENST00000415670 DYNC1LI2O43237 492 aaPredicted RBP19.47■□□□□ 0.71
CDC42EP1-202ENST00000415670 ZBED4O75132 1171 aa19.47■□□□□ 0.71
CDC42EP1-202ENST00000415670 PRDM1O75626 825 aa19.47■□□□□ 0.71
CDC42EP1-202ENST00000415670 SMPD1P17405 629 aa19.47■□□□□ 0.71
CDC42EP1-202ENST00000415670 COPB2P35606 906 aa19.47■□□□□ 0.71
CDC42EP1-202ENST00000415670 TNFAIP2Q03169 654 aa19.47■□□□□ 0.71
CDC42EP1-202ENST00000415670 CTDSPL2Q05D32 466 aa19.47■□□□□ 0.71
CDC42EP1-202ENST00000415670 AGBL1Q96MI9 1066 aa19.47■□□□□ 0.71
CDC42EP1-202ENST00000415670 SLC38A10Q9HBR0 1119 aa19.47■□□□□ 0.71
CDC42EP1-202ENST00000415670 TAF6LQ9Y6J9 622 aa19.47■□□□□ 0.71
CDC42EP1-202ENST00000415670 SLC3A2P08195 630 aaKnown RBP19.46■□□□□ 0.71
CDC42EP1-202ENST00000415670 SKIV2LQ15477 1246 aaKnown RBP19.46■□□□□ 0.71
CDC42EP1-202ENST00000415670 PPP2R2DQ66LE6 453 aa19.46■□□□□ 0.71
CDC42EP1-202ENST00000415670 CCDC174Q6PII3 467 aa19.46■□□□□ 0.71
CDC42EP1-202ENST00000415670 TBC1D10CQ8IV04 446 aa19.46■□□□□ 0.71
CDC42EP1-202ENST00000415670 LRRC47Q8N1G4 583 aaKnown RBP19.46■□□□□ 0.71
CDC42EP1-202ENST00000415670 IL27Q8NEV9 243 aa19.46■□□□□ 0.71
CDC42EP1-202ENST00000415670 LRFN3Q9BTN0 628 aa19.46■□□□□ 0.71
CDC42EP1-202ENST00000415670 SPC25Q9HBM1 224 aa19.46■□□□□ 0.71
CDC42EP1-202ENST00000415670 NYAP2Q9P242 653 aa19.46■□□□□ 0.71
CDC42EP1-202ENST00000415670 IGKV6D-41A0A0C4DH26 115 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 ZBBXA8MT70 800 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 ATP2A1O14983 1001 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 PCP11498 1178 aaKnown RBP19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 CYP2C9P11712 490 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 HOXD11P31277 338 aaPredicted RBP19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 NKX3-2P78367 333 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 KRT32Q14532 448 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 RASGRP2Q7LDG7 609 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 DEFB128Q7Z7B8 93 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 FAM133AQ8N9E0 248 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 STAG1Q8WVM7 1258 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 MTCH2Q9Y6C9 303 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 SLC4A7Q9Y6M7 1214 aa19.45■□□□□ 0.7
CDC42EP1-202ENST00000415670 FAM86C2PA6NEL3 165 aa19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 E7EWF7 191 aa19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 CA3P07451 260 aa19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 FGRP09769 529 aa19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 FSCN1Q16658 493 aaKnown RBP19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 TAPT1Q6NXT6 567 aa19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 STOX1Q6ZVD7 989 aa19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 TLK2Q86UE8 772 aa19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 RNF41Q9H4P4 317 aaPredicted RBP19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 A1CFQ9NQ94 594 aaKnown RBP19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 TRMT13Q9NUP7 481 aaKnown RBP19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 ZNF536O15090 1300 aa19.44■□□□□ 0.7
CDC42EP1-202ENST00000415670 MUM1L1Q5H9M0 696 aa19.43■□□□□ 0.7
CDC42EP1-202ENST00000415670 MFSD6Q6ZSS7 791 aa19.43■□□□□ 0.7
CDC42EP1-202ENST00000415670 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDC42EP1-202ENST00000415670 FBXO16Q8IX29 292 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP1-202ENST00000415670 CEP95Q96GE4 821 aa19.43■□□□□ 0.7
CDC42EP1-202ENST00000415670 KIF2CQ99661 725 aa19.43■□□□□ 0.7
CDC42EP1-202ENST00000415670 MKNK2Q9HBH9 465 aa19.43■□□□□ 0.7
CDC42EP1-202ENST00000415670 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDC42EP1-202ENST00000415670 CTDP1Q9Y5B0 961 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP1-202ENST00000415670 PCDHA11Q9Y5I1 949 aa19.43■□□□□ 0.7
CDC42EP1-202ENST00000415670 TLL1O43897 1013 aa19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 ORC4O43929 436 aa19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 ATP2A2P16615 1042 aaKnown RBP19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 PDE4BQ07343 736 aa19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 ADCK5Q3MIX3 580 aa19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 CHST13Q8NET6 341 aa19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 TM6SF1Q9BZW5 370 aa19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 CNNM2Q9H8M5 875 aa19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 CD320Q9NPF0 282 aa19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 C11orf16Q9NQ32 467 aa19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 INCENPQ9NQS7 918 aa19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 LCTP09848 1927 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms