RNA–Protein interactions for RNA: ENST00000415579.2

PTCD2P2-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 2, humanhuman

BASIC

Gene PTCD2P2, Length 1,095 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P2-201ENST00000415579 TMEM94Q12767 1356 aa8.09□□□□□ -1.12
PTCD2P2-201ENST00000415579 C1orf167Q5SNV9 1468 aa8.08□□□□□ -1.12
PTCD2P2-201ENST00000415579 SHISA3A0PJX4 238 aa8.08□□□□□ -1.12
PTCD2P2-201ENST00000415579 FAM221AA4D161 298 aa8.08□□□□□ -1.12
PTCD2P2-201ENST00000415579 CILPO75339 1184 aa8.08□□□□□ -1.12
PTCD2P2-201ENST00000415579 ZGLP1P0C6A0 271 aa8.08□□□□□ -1.12
PTCD2P2-201ENST00000415579 RUNDC1Q96C34 613 aa8.08□□□□□ -1.12
PTCD2P2-201ENST00000415579 EBF1Q9UH73 591 aa8.08□□□□□ -1.12
PTCD2P2-201ENST00000415579 KLHL3Q9UH77 587 aa8.08□□□□□ -1.12
PTCD2P2-201ENST00000415579 NUDCQ9Y266 331 aa8.08□□□□□ -1.12
PTCD2P2-201ENST00000415579 CDK12Q9NYV4 1490 aaPredicted RBP8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 DIAPH1O60610 1272 aaKnown RBP8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 IL13P35225 146 aa8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 TNNI2P48788 182 aa8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 FAM160A1Q05DH4 1040 aa8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 KCNA10Q16322 511 aa8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 CCDC27Q2M243 656 aa8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 TRMT2AQ8IZ69 625 aaKnown RBP8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 PLEKHF1Q96S99 279 aa8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 NOC4LQ9BVI4 516 aaKnown RBP8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 CD320Q9NPF0 282 aa8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 SMG5Q9UPR3 1016 aaKnown RBP8.07□□□□□ -1.12
PTCD2P2-201ENST00000415579 RNF123Q5XPI4 1314 aa8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 MAP2P11137 1827 aaKnown RBP8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 MINDY4BA8MYZ0 360 aa8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 DNAJA2O60884 412 aa8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 BPNT1O95861 308 aa8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 FBLN1P23142 703 aa8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 XPCQ01831 940 aaPredicted RBP8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 AEBP1Q8IUX7 1158 aa8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 FBXO27Q8NI29 283 aa8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 REV1Q9UBZ9 1251 aa8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 KCNH3Q9ULD8 1083 aa8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 POLR3KQ9Y2Y1 108 aaPredicted RBP8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 KIF24Q5T7B8 1368 aa8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 IQSEC2Q5JU85 1478 aa8.06□□□□□ -1.12
PTCD2P2-201ENST00000415579 APAF1O14727 1248 aa8.05□□□□□ -1.12
PTCD2P2-201ENST00000415579 RLBP1P12271 317 aa8.05□□□□□ -1.12
PTCD2P2-201ENST00000415579 ST13P50502 369 aaKnown RBP8.05□□□□□ -1.12
PTCD2P2-201ENST00000415579 YARSP54577 528 aaKnown RBP8.05□□□□□ -1.12
PTCD2P2-201ENST00000415579 TMEM201Q5SNT2 666 aa8.05□□□□□ -1.12
PTCD2P2-201ENST00000415579 GATAD2BQ8WXI9 593 aa8.05□□□□□ -1.12
PTCD2P2-201ENST00000415579 KREMEN1Q96MU8 473 aa8.05□□□□□ -1.12
PTCD2P2-201ENST00000415579 ORAI2Q96SN7 254 aa8.05□□□□□ -1.12
PTCD2P2-201ENST00000415579 PIK3C2AO00443 1686 aa8.05□□□□□ -1.12
PTCD2P2-201ENST00000415579 TCAF2A6NFQ2 919 aa8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 U2AF1L5P0DN76 240 aaPredicted RBP8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 ATF3P18847 181 aa8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 GBP2P32456 591 aaPredicted RBP8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 U2AF1Q01081 240 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 LMNB2Q03252 620 aa8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 SLFN5Q08AF3 891 aa8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 SND1Q7KZF4 910 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 ZNF605Q86T29 641 aa8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 CCDC146Q8IYE0 955 aa8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 TCP11L2Q8N4U5 519 aa8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 PDZD8Q8NEN9 1154 aa8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 RNF141Q8WVD5 230 aa8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 KIF2CQ99661 725 aa8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 PNNQ9H307 717 aaKnown RBP8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 KIF1AQ12756 1690 aa8.04□□□□□ -1.12
PTCD2P2-201ENST00000415579 MARF1Q9Y4F3 1742 aaKnown RBP8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 XIRP1Q702N8 1843 aaKnown RBP8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 SBNO1A3KN83 1393 aa8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 RRS1Q15050 365 aaKnown RBP8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 ERICH6BQ5W0A0 696 aa8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 LILRA6Q6PI73 481 aa8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 DNAJC14Q6Y2X3 702 aaPredicted RBP8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 TMC4Q7Z404 712 aa8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 SIAH1Q8IUQ4 282 aa8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 WDR63Q8IWG1 891 aa8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 SIRT2Q8IXJ6 389 aa8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 SLFN12Q8IYM2 578 aa8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 MCOLN1Q9GZU1 580 aa8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 USP19O94966 1318 aa8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 MAP3K19Q56UN5 1328 aa8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 ZNF335Q9H4Z2 1342 aaPredicted RBP8.03□□□□□ -1.12
PTCD2P2-201ENST00000415579 MSH6P52701 1360 aa8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 HTR3BO95264 441 aa8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 MED14OSP0DP75 135 aa8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 GLDCP23378 1020 aa8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 KRT28Q7Z3Y7 464 aa8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 CCDC84Q86UT8 332 aaPredicted RBP8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 PHACTR4Q8IZ21 702 aa8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 GOLM1Q8NBJ4 401 aa8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 RHOVQ96L33 236 aa8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 SGPP1Q9BX95 441 aa8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 IRF2BPLQ9H1B7 796 aa8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 SUPT16HQ9Y5B9 1047 aaKnown RBP8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 TRPM3Q9HCF6 1732 aaPredicted RBP8.02□□□□□ -1.13
PTCD2P2-201ENST00000415579 PEAK1Q9H792 1746 aa8.01□□□□□ -1.13
PTCD2P2-201ENST00000415579 FLT4P35916 1363 aa8.01□□□□□ -1.13
PTCD2P2-201ENST00000415579 MYOCOSA0A1B0GUC4 107 aa8.01□□□□□ -1.13
PTCD2P2-201ENST00000415579 U2SURPO15042 1029 aaKnown RBP8.01□□□□□ -1.13
PTCD2P2-201ENST00000415579 TLR3O15455 904 aaKnown RBP8.01□□□□□ -1.13
PTCD2P2-201ENST00000415579 NUAK1O60285 661 aa8.01□□□□□ -1.13
PTCD2P2-201ENST00000415579 PSPNO60542 156 aa8.01□□□□□ -1.13
PTCD2P2-201ENST00000415579 EFEMP2O95967 443 aa8.01□□□□□ -1.13
PTCD2P2-201ENST00000415579 TMPOP42166 694 aaKnown RBP8.01□□□□□ -1.13
PTCD2P2-201ENST00000415579 LINC00310P59036 64 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms