RNA–Protein interactions for RNA: ENST00000415452.5

RUBCN-204, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 1 (best)

Gene RUBCN, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-204ENST00000415452 SHROOM1Q2M3G4 852 aaPredicted RBP12.81□□□□□ -0.36
RUBCN-204ENST00000415452 SPECC1LQ69YQ0 1117 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 GMCL1P1Q8NEA9 526 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 PSTPIP2Q9H939 334 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 GDF11O95390 407 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 VIL1P09327 827 aaKnown RBP12.81□□□□□ -0.36
RUBCN-204ENST00000415452 PLCG1P19174 1290 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 TXKP42681 527 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 TNNI2P48788 182 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.36
RUBCN-204ENST00000415452 PAK1Q13153 545 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 TMEM266Q2M3C6 531 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 RBM26Q5T8P6 1007 aaKnown RBP12.81□□□□□ -0.36
RUBCN-204ENST00000415452 PPP4R3AQ6IN85 833 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 LARGE2Q8N3Y3 721 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 SLC16A10Q8TF71 515 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 CSRNP1Q96S65 589 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 PLIN2Q99541 437 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 VPS33BQ9H267 617 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 HDAC9Q9UKV0 1011 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
RUBCN-204ENST00000415452 SPDYE2BA6NHP3 402 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 USP27XA6NNY8 438 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 F5H6K3 240 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 EDIL3O43854 480 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 SPDYE6P0CI01 402 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 KLRC3Q07444 240 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 UBE2SQ16763 222 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 QRICH1Q2TAL8 776 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 APTXQ7Z2E3 356 aaKnown RBP12.8□□□□□ -0.36
RUBCN-204ENST00000415452 CALML4Q96GE6 196 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 RAB34Q9BZG1 259 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 HERC5Q9UII4 1024 aaKnown RBP12.8□□□□□ -0.36
RUBCN-204ENST00000415452 TDP2O95551 362 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 DPEP1P16444 411 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 PDIA5Q14554 519 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 PTPN14Q15678 1187 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 NELFBQ8WX92 580 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 GMCL1Q96IK5 515 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 GMLQ99445 158 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 TMX1Q9H3N1 280 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 LRWD1Q9UFC0 647 aa12.8□□□□□ -0.36
RUBCN-204ENST00000415452 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.8□□□□□ -0.36
RUBCN-204ENST00000415452 PSMD14O00487 310 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 SLC37A4O43826 429 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 KLRC4O43908 158 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 RHOBTB3O94955 611 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 KCNA3P22001 575 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 GTF2F1P35269 517 aaKnown RBP eCLIP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 AMPD3Q01432 767 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 CDC37Q16543 378 aaPredicted RBP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 KMT5BQ4FZB7 885 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 FILIP1LQ4L180 1135 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 NYAP1Q6ZVC0 841 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 LRRC15Q8TF66 581 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 NAP1L4Q99733 375 aaKnown RBP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 MMTAG2Q9BU76 263 aaKnown RBP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 SYNPO2Q9UMS6 1093 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 GDAQ9Y2T3 454 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 PAXBP1Q9Y5B6 917 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 PCDHA1Q9Y5I3 950 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 RAD17O75943 681 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 GH2P01242 217 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 GCFC2P16383 781 aaKnown RBP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 PRCPP42785 496 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 DLGAP5Q15398 846 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 E4F1Q66K89 784 aaPredicted RBP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 ADSSL1Q8N142 457 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 CCDC47Q96A33 483 aaKnown RBP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 C7orf25Q9BPX7 421 aa12.79□□□□□ -0.36
RUBCN-204ENST00000415452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 ZNF277Q9NRM2 450 aaPredicted RBP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 TRMT1Q9NXH9 659 aaKnown RBP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 ADD3Q9UEY8 706 aaKnown RBP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 ATF5Q9Y2D1 282 aaPredicted RBP12.79□□□□□ -0.36
RUBCN-204ENST00000415452 SPAG1Q07617 926 aa12.78□□□□□ -0.36
RUBCN-204ENST00000415452 STIM1Q13586 685 aa12.78□□□□□ -0.36
RUBCN-204ENST00000415452 PTPN21Q16825 1174 aa12.78□□□□□ -0.36
RUBCN-204ENST00000415452 CEP135Q66GS9 1140 aa12.78□□□□□ -0.36
RUBCN-204ENST00000415452 GIMAP8Q8ND71 665 aaPredicted RBP12.78□□□□□ -0.36
RUBCN-204ENST00000415452 FAM151AQ8WW52 585 aa12.78□□□□□ -0.36
RUBCN-204ENST00000415452 ZNF70Q9UC06 446 aaPredicted RBP12.78□□□□□ -0.36
RUBCN-204ENST00000415452 MYH7BA7E2Y1 1941 aa12.78□□□□□ -0.36
RUBCN-204ENST00000415452 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
RUBCN-204ENST00000415452 CCP110O43303 1012 aa12.78□□□□□ -0.36
RUBCN-204ENST00000415452 NDUFB10O96000 172 aa12.78□□□□□ -0.36
RUBCN-204ENST00000415452 TRIM9Q9C026 710 aa12.78□□□□□ -0.36
RUBCN-204ENST00000415452 LIMA1Q9UHB6 759 aaKnown RBP12.78□□□□□ -0.36
RUBCN-204ENST00000415452 DDX25Q9UHL0 483 aaKnown RBP12.78□□□□□ -0.36
RUBCN-204ENST00000415452 UTRNP46939 3433 aa12.78□□□□□ -0.36
RUBCN-204ENST00000415452 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.36
RUBCN-204ENST00000415452 LRRC10BA6NIK2 292 aa12.77□□□□□ -0.36
RUBCN-204ENST00000415452 H7C1D1 291 aa12.77□□□□□ -0.36
RUBCN-204ENST00000415452 KIF2AO00139 706 aaPredicted RBP12.77□□□□□ -0.36
RUBCN-204ENST00000415452 BMP3P12645 472 aa12.77□□□□□ -0.36
RUBCN-204ENST00000415452 JAG1P78504 1218 aa12.77□□□□□ -0.36
RUBCN-204ENST00000415452 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.36
RUBCN-204ENST00000415452 MCTP2Q6DN12 878 aa12.77□□□□□ -0.36
RUBCN-204ENST00000415452 ANKRD20A12PQ8NF67 263 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms