RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ZNF865P0CJ78 1059 aaPredicted RBP17.01■□□□□ 0.31
CHD1-202ENST00000414220 RXRAP19793 462 aa17.01■□□□□ 0.31
CHD1-202ENST00000414220 ALDH5A1P51649 535 aaPredicted RBP17.01■□□□□ 0.31
CHD1-202ENST00000414220 PDE4DQ08499 809 aa17.01■□□□□ 0.31
CHD1-202ENST00000414220 RNF180Q86T96 592 aa17.01■□□□□ 0.31
CHD1-202ENST00000414220 PIBF1Q8WXW3 757 aa17.01■□□□□ 0.31
CHD1-202ENST00000414220 BRF1Q92994 677 aa17.01■□□□□ 0.31
CHD1-202ENST00000414220 CUL5Q93034 780 aa17.01■□□□□ 0.31
CHD1-202ENST00000414220 PAWRQ96IZ0 340 aaKnown RBP17.01■□□□□ 0.31
CHD1-202ENST00000414220 C11orf49Q9H6J7 331 aa17.01■□□□□ 0.31
CHD1-202ENST00000414220 ZNFX1Q9P2E3 1918 aaKnown RBP17.01■□□□□ 0.31
CHD1-202ENST00000414220 GCOM1H8Y6P7 765 aaPredicted RBP17■□□□□ 0.31
CHD1-202ENST00000414220 CYTH3O43739 400 aa17■□□□□ 0.31
CHD1-202ENST00000414220 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
CHD1-202ENST00000414220 POLR2MP0CAP2 368 aa17■□□□□ 0.31
CHD1-202ENST00000414220 TAL1P17542 331 aaPredicted RBP17■□□□□ 0.31
CHD1-202ENST00000414220 METAP2P50579 478 aaKnown RBP eCLIP17■□□□□ 0.31
CHD1-202ENST00000414220 SLC30A10Q6XR72 485 aa17■□□□□ 0.31
CHD1-202ENST00000414220 TMTC3Q6ZXV5 915 aa17■□□□□ 0.31
CHD1-202ENST00000414220 NOL8Q76FK4 1167 aaKnown RBP17■□□□□ 0.31
CHD1-202ENST00000414220 RAB11FIP4Q86YS3 637 aa17■□□□□ 0.31
CHD1-202ENST00000414220 NSUN6Q8TEA1 469 aaKnown RBP17■□□□□ 0.31
CHD1-202ENST00000414220 DPF3Q92784 378 aa17■□□□□ 0.31
CHD1-202ENST00000414220 VTA1Q9NP79 307 aa17■□□□□ 0.31
CHD1-202ENST00000414220 XPNPEP3Q9NQH7 507 aa17■□□□□ 0.31
CHD1-202ENST00000414220 DNM1LO00429 736 aa16.99■□□□□ 0.31
CHD1-202ENST00000414220 PLEKHA8P1O95397 391 aa16.99■□□□□ 0.31
CHD1-202ENST00000414220 CPA1P15085 419 aa16.99■□□□□ 0.31
CHD1-202ENST00000414220 ARHGEF16Q5VV41 709 aa16.99■□□□□ 0.31
CHD1-202ENST00000414220 IQSEC1Q6DN90 963 aa16.99■□□□□ 0.31
CHD1-202ENST00000414220 CCDC82Q8N4S0 544 aa16.99■□□□□ 0.31
CHD1-202ENST00000414220 SRBD1Q8N5C6 995 aaKnown RBP16.99■□□□□ 0.31
CHD1-202ENST00000414220 FGD4Q96M96 766 aa16.99■□□□□ 0.31
CHD1-202ENST00000414220 IWS1Q96ST2 819 aa16.99■□□□□ 0.31
CHD1-202ENST00000414220 BRPF3Q9ULD4 1205 aa16.99■□□□□ 0.31
CHD1-202ENST00000414220 DUSP11O75319 330 aaKnown RBP16.98■□□□□ 0.31
CHD1-202ENST00000414220 AKAP17AQ02040 695 aaKnown RBP16.98■□□□□ 0.31
CHD1-202ENST00000414220 TNFAIP2Q03169 654 aa16.98■□□□□ 0.31
CHD1-202ENST00000414220 APOBRQ0VD83 1088 aa16.98■□□□□ 0.31
CHD1-202ENST00000414220 COL9A3Q14050 684 aaPredicted RBP16.98■□□□□ 0.31
CHD1-202ENST00000414220 CCDC144BQ3MJ40 725 aa16.98■□□□□ 0.31
CHD1-202ENST00000414220 ANO1Q5XXA6 986 aa16.98■□□□□ 0.31
CHD1-202ENST00000414220 SYTL5Q8TDW5 730 aaPredicted RBP16.98■□□□□ 0.31
CHD1-202ENST00000414220 MORC4Q8TE76 937 aa16.98■□□□□ 0.31
CHD1-202ENST00000414220 RMDN3Q96TC7 470 aa16.98■□□□□ 0.31
CHD1-202ENST00000414220 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
CHD1-202ENST00000414220 RBM27Q9P2N5 1060 aaKnown RBP16.98■□□□□ 0.31
CHD1-202ENST00000414220 ANKRD1Q15327 319 aa16.97■□□□□ 0.31
CHD1-202ENST00000414220 CPLX2Q6PUV4 134 aaKnown RBP16.97■□□□□ 0.31
CHD1-202ENST00000414220 EEPD1Q7L9B9 569 aa16.97■□□□□ 0.31
CHD1-202ENST00000414220 UBE2Q1Q7Z7E8 422 aa16.97■□□□□ 0.31
CHD1-202ENST00000414220 CMTR1Q8N1G2 835 aaKnown RBP16.97■□□□□ 0.31
CHD1-202ENST00000414220 AGXT2Q9BYV1 514 aa16.97■□□□□ 0.31
CHD1-202ENST00000414220 AP5M1Q9H0R1 490 aa16.97■□□□□ 0.31
CHD1-202ENST00000414220 NR2E3Q9Y5X4 410 aa16.97■□□□□ 0.31
CHD1-202ENST00000414220 PLXNA1Q9UIW2 1896 aa16.97■□□□□ 0.31
CHD1-202ENST00000414220 hCG_1984214I3L0E3 225 aa16.96■□□□□ 0.31
CHD1-202ENST00000414220 PPP1R11O60927 126 aaPredicted RBP16.96■□□□□ 0.31
CHD1-202ENST00000414220 HSD17B4P51659 736 aa16.96■□□□□ 0.31
CHD1-202ENST00000414220 GHRHRQ02643 423 aa16.96■□□□□ 0.31
CHD1-202ENST00000414220 STXBP2Q15833 593 aa16.96■□□□□ 0.31
CHD1-202ENST00000414220 GJC2Q5T442 439 aaPredicted RBP16.96■□□□□ 0.31
CHD1-202ENST00000414220 ZNF713Q8N859 430 aaPredicted RBP16.96■□□□□ 0.31
CHD1-202ENST00000414220 PCSK9Q8NBP7 692 aaKnown RBP16.96■□□□□ 0.31
CHD1-202ENST00000414220 SMARCC2Q8TAQ2 1214 aa16.96■□□□□ 0.31
CHD1-202ENST00000414220 TBC1D5Q92609 795 aa16.96■□□□□ 0.31
CHD1-202ENST00000414220 PURBQ96QR8 312 aaKnown RBP16.96■□□□□ 0.31
CHD1-202ENST00000414220 TAAR1Q96RJ0 339 aa16.96■□□□□ 0.31
CHD1-202ENST00000414220 UPF3BQ9BZI7 483 aaKnown RBP16.96■□□□□ 0.31
CHD1-202ENST00000414220 UPF2Q9HAU5 1272 aaKnown RBP16.96■□□□□ 0.31
CHD1-202ENST00000414220 CENPFP49454 3210 aa16.95■□□□□ 0.3
CHD1-202ENST00000414220 ZEB2O60315 1214 aa16.95■□□□□ 0.3
CHD1-202ENST00000414220 EVI5O60447 810 aa16.95■□□□□ 0.3
CHD1-202ENST00000414220 SLC35G1Q2M3R5 365 aa16.95■□□□□ 0.3
CHD1-202ENST00000414220 BRDTQ58F21 947 aaPredicted RBP16.95■□□□□ 0.3
CHD1-202ENST00000414220 HEATR3Q7Z4Q2 680 aa16.95■□□□□ 0.3
CHD1-202ENST00000414220 SCFD2Q8WU76 684 aa16.95■□□□□ 0.3
CHD1-202ENST00000414220 ZNF274Q96GC6 653 aaPredicted RBP16.95■□□□□ 0.3
CHD1-202ENST00000414220 TSEN34Q9BSV6 310 aaKnown RBP16.95■□□□□ 0.3
CHD1-202ENST00000414220 SENP6Q9GZR1 1112 aaPredicted RBP16.95■□□□□ 0.3
CHD1-202ENST00000414220 GLT8D2Q9H1C3 349 aa16.95■□□□□ 0.3
CHD1-202ENST00000414220 PSTPIP2Q9H939 334 aa16.95■□□□□ 0.3
CHD1-202ENST00000414220 Q9Y3F1 56 aa16.95■□□□□ 0.3
CHD1-202ENST00000414220 V9GY48 417 aaPredicted RBP16.95■□□□□ 0.3
CHD1-202ENST00000414220 CPLX1O14810 134 aa16.94■□□□□ 0.3
CHD1-202ENST00000414220 NKRFO15226 690 aaKnown RBP eCLIP16.94■□□□□ 0.3
CHD1-202ENST00000414220 EIF3JO75822 258 aaKnown RBP16.94■□□□□ 0.3
CHD1-202ENST00000414220 PGK1P00558 417 aa16.94■□□□□ 0.3
CHD1-202ENST00000414220 C6orf222P0C671 652 aaPredicted RBP16.94■□□□□ 0.3
CHD1-202ENST00000414220 EDNRBP24530 442 aa16.94■□□□□ 0.3
CHD1-202ENST00000414220 ADCYAP1R1P41586 468 aa16.94■□□□□ 0.3
CHD1-202ENST00000414220 EVCP57679 992 aa16.94■□□□□ 0.3
CHD1-202ENST00000414220 LRRC41Q15345 812 aa16.94■□□□□ 0.3
CHD1-202ENST00000414220 FCHSD1Q86WN1 690 aa16.94■□□□□ 0.3
CHD1-202ENST00000414220 TEX2Q8IWB9 1127 aa16.94■□□□□ 0.3
CHD1-202ENST00000414220 FBXO16Q8IX29 292 aaPredicted RBP16.94■□□□□ 0.3
CHD1-202ENST00000414220 DIS3LQ8TF46 1054 aaKnown RBP16.94■□□□□ 0.3
CHD1-202ENST00000414220 CCDC12Q8WUD4 166 aaPredicted RBP16.94■□□□□ 0.3
CHD1-202ENST00000414220 KATNBL1Q9H079 304 aa16.94■□□□□ 0.3
CHD1-202ENST00000414220 PXMP2Q9NR77 195 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms