RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ACTL7BQ9Y614 415 aa4.24□□□□□ -1.73
SF3B1-203ENST00000414174 BOLA2-SMG1P6H3BVE0 249 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 CPLX1O14810 134 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 PPFIA2O75334 1257 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 FGRP09769 529 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 XBP1P17861 261 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 CAP2P40123 477 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 SH3BGRP55822 239 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-203ENST00000414174 SNX16P57768 344 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 BNIP3Q12983 259 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 BIRC3Q13489 604 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 DSC3Q14574 896 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 KIF22Q14807 665 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 SEPT7Q16181 437 aaKnown RBP4.23□□□□□ -1.73
SF3B1-203ENST00000414174 COBLL1Q53SF7 1204 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 BRDTQ58F21 947 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-203ENST00000414174 AGAP9Q5VTM2 703 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 PPP4R3AQ6IN85 833 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 CFAP161Q6P656 301 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 TAX1BP1Q86VP1 789 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 KIAA0825Q8IV33 1275 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 CPXCR1Q8N123 301 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 PI4K2BQ8TCG2 481 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 NEK9Q8TD19 979 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 N4BP2L2Q92802 583 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-203ENST00000414174 GSDMAQ96QA5 445 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 CITED4Q96RK1 184 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 CSRNP1Q96S65 589 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 CSRNP2Q9H175 543 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 EHD4Q9H223 541 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 VPS33BQ9H267 617 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 RPAP3Q9H6T3 665 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-203ENST00000414174 RMI1Q9H9A7 625 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 TRPV5Q9NQA5 729 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.23□□□□□ -1.73
SF3B1-203ENST00000414174 EPS15L1Q9UBC2 864 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 RABL2AQ9UBK7 228 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-203ENST00000414174 SEL1LQ9UBV2 794 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 TPCN1Q9ULQ1 816 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 PIK3R4Q99570 1358 aa4.23□□□□□ -1.73
SF3B1-203ENST00000414174 SHTN1A0MZ66 631 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 hCG_1984214I3L0E3 225 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 DYNC1LI2O43237 492 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 CDC45O75419 566 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 E2F6O75461 281 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 NFICP08651 508 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 CD8BP10966 210 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 GYS1P13807 737 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 RAC2P15153 192 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 VCAM1P19320 739 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 DDIT3P35638 169 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 SARSP49591 514 aaKnown RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 COPAP53621 1224 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 BPIFB3P59826 476 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 UBXN2AP68543 259 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 NUCB1Q02818 461 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 PDE3BQ13370 1112 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 PPP2R5BQ15173 497 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 POU4F3Q15319 338 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 PUM3Q15397 648 aaKnown RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 TAF7Q15545 349 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 LMBRD2Q68DH5 695 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 ZNF449Q6P9G9 518 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 CDC37L1Q7L3B6 337 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 ZSCAN29Q8IWY8 852 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 MYOCDQ8IZQ8 938 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 LRRN4CLQ8ND94 238 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 FLAD1Q8NFF5 587 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 GABPB2Q8TAK5 448 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 WDR66Q8TBY9 1149 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 CHMP4CQ96CF2 233 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 WDR89Q96FK6 387 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 TRMT2BQ96GJ1 504 aaKnown RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 RMDN2Q96LZ7 410 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 NELL2Q99435 816 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 MMTAG2Q9BU76 263 aaKnown RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 WDR18Q9BV38 432 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 IQCGQ9H095 443 aaKnown RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 GSX1Q9H4S2 264 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 DIAPH3Q9NSV4 1193 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 FAM105AQ9NUU6 356 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 MKS1Q9NXB0 559 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 TRMT1Q9NXH9 659 aaKnown RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 CPSF2Q9P2I0 782 aaKnown RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 ZMAT5Q9UDW3 170 aaKnown RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 TBK1Q9UHD2 729 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 ADAMTS6Q9UKP5 1117 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 ZHX1Q9UKY1 873 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 ITM2BQ9Y287 266 aa4.22□□□□□ -1.73
SF3B1-203ENST00000414174 EIF4G1Q04637 1599 aaKnown RBP4.22□□□□□ -1.73
SF3B1-203ENST00000414174 ZNF503-AS2A6NEH8 195 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 SMTNL1A8MU46 457 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 H0Y3Z8 333 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 FOXN3O00409 490 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 SLC27A2O14975 620 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 ZNF862O60290 1169 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 ALDH1L1O75891 902 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 KIAA0754O94854 1291 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 ARIH2O95376 493 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 SCGB1D2O95969 90 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms