RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 PRRT3Q5FWE3 981 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 RNF219Q5W0B1 726 aaPredicted RBP7.32□□□□□ -1.24
NOD1-203ENST00000413433 NSMFQ6X4W1 530 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 ADAT2Q7Z6V5 191 aaKnown RBP7.32□□□□□ -1.24
NOD1-203ENST00000413433 ZNF227Q86WZ6 799 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 SLFN12Q8IYM2 578 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 DDX1Q92499 740 aaKnown RBP7.32□□□□□ -1.24
NOD1-203ENST00000413433 MDFIQ99750 246 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 ASPSCR1Q9BZE9 553 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 NDOR1Q9UHB4 597 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 HFM1A2PYH4 1435 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 PTCH1Q13635 1447 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 SRCAPQ6ZRS2 3230 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 BCL9LQ86UU0 1499 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 ADARB2-AS1A8MUL3 147 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 NOP56O00567 594 aaKnown RBP7.31□□□□□ -1.24
NOD1-203ENST00000413433 FSCN2O14926 492 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 OPA1O60313 960 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 ATRNO75882 1429 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 ITGAVP06756 1048 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 PABPC1P11940 636 aaKnown RBP7.31□□□□□ -1.24
NOD1-203ENST00000413433 ALAS2P22557 587 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 HDAC1Q13547 482 aaPredicted RBP7.31□□□□□ -1.24
NOD1-203ENST00000413433 PRSS36Q5K4E3 855 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 PPP4R4Q6NUP7 873 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 STRA8Q7Z7C7 330 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 PPFIBP1Q86W92 1011 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 UNC5CLQ8IV45 518 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 CCDC144CPQ8IYA2 1237 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 CHPFQ8IZ52 775 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 MYO1HQ8N1T3 1032 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 WDR89Q96FK6 387 aaPredicted RBP7.31□□□□□ -1.24
NOD1-203ENST00000413433 TMEM87BQ96K49 555 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 CCDC74BQ96LY2 380 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 FGD4Q96M96 766 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 NRSN2Q9GZP1 204 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 JPH1Q9HDC5 661 aaPredicted RBP7.31□□□□□ -1.24
NOD1-203ENST00000413433 HIF3AQ9Y2N7 669 aa7.31□□□□□ -1.24
NOD1-203ENST00000413433 RGS13O14921 159 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 BRINP1O60477 761 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 EFCAB14O75071 495 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 EYA4O95677 639 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 FLT3P36888 993 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 RAB27AP51159 221 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 UBE4AQ14139 1066 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 LRRC41Q15345 812 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 MAP9Q49MG5 647 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 ZC3H12AQ5D1E8 599 aaKnown RBP7.3□□□□□ -1.24
NOD1-203ENST00000413433 PPM1JQ5JR12 505 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 SLC6A19Q695T7 634 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 BRAPQ7Z569 592 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 DEFB132Q7Z7B7 95 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 ZBTB46Q86UZ6 589 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 MCATQ8IVS2 390 aaKnown RBP7.3□□□□□ -1.24
NOD1-203ENST00000413433 TMEM192Q8IY95 271 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 CARD10Q9BWT7 1032 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 AASDHPPTQ9NRN7 309 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 RAD18Q9NS91 495 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 ZIM2Q9NZV7 527 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 APEX2Q9UBZ4 518 aa7.3□□□□□ -1.24
NOD1-203ENST00000413433 SPATA31A3Q5VYP0 1347 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 CCDC144AA2RUR9 1427 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 ELOA3CA0A087WX78 387 aaPredicted RBP7.29□□□□□ -1.24
NOD1-203ENST00000413433 E2F8A0AVK6 867 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 ELOA3DA6NLF2 546 aaPredicted RBP7.29□□□□□ -1.24
NOD1-203ENST00000413433 KPNA6O60684 536 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 PPM1BO75688 479 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 DNAJC8O75937 253 aaPredicted RBP7.29□□□□□ -1.24
NOD1-203ENST00000413433 NPTXRO95502 500 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 MYL1P05976 194 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 CTSBP07858 339 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 NLRP12P59046 1061 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 MTMR1Q13613 665 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 LRP8Q14114 963 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 BRD3Q15059 726 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 ELOA3BQ3SY89 546 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 TRIM61Q5EBN2 209 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 PKN3Q6P5Z2 889 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 SPATS2Q86XZ4 545 aaKnown RBP7.29□□□□□ -1.24
NOD1-203ENST00000413433 HID1Q8IV36 788 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 CRACR2BQ8N4Y2 399 aaPredicted RBP7.29□□□□□ -1.24
NOD1-203ENST00000413433 ELOA3Q8NG57 546 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 USP7Q93009 1102 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 PRAM1Q96QH2 718 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 MKRN2Q9H000 416 aaKnown RBP7.29□□□□□ -1.24
NOD1-203ENST00000413433 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.29□□□□□ -1.24
NOD1-203ENST00000413433 TJP2Q9UDY2 1190 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 LRPPRCP42704 1394 aaKnown RBP7.29□□□□□ -1.24
NOD1-203ENST00000413433 ABCC11Q96J66 1382 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 MYOM2P54296 1465 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 PXDNQ92626 1479 aa7.29□□□□□ -1.24
NOD1-203ENST00000413433 FAM83GA6ND36 823 aa7.28□□□□□ -1.24
NOD1-203ENST00000413433 C9IYK1 514 aa7.28□□□□□ -1.24
NOD1-203ENST00000413433 FANCGO15287 622 aa7.28□□□□□ -1.24
NOD1-203ENST00000413433 ERVK-24P63145 666 aa7.28□□□□□ -1.24
NOD1-203ENST00000413433 GABREP78334 506 aa7.28□□□□□ -1.24
NOD1-203ENST00000413433 PIN1Q13526 163 aaPredicted RBP7.28□□□□□ -1.24
NOD1-203ENST00000413433 DHCR24Q15392 516 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms