RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 REC8O95072 547 aa21.88■■□□□ 1.09
TRIM56-202ENST00000412507 HSPA4P34932 840 aa21.88■■□□□ 1.09
TRIM56-202ENST00000412507 ADCYAP1R1P41586 468 aa21.88■■□□□ 1.09
TRIM56-202ENST00000412507 ATN1P54259 1190 aaPredicted RBP21.88■■□□□ 1.09
TRIM56-202ENST00000412507 EXOSC10Q01780 885 aaKnown RBP21.88■■□□□ 1.09
TRIM56-202ENST00000412507 KRT32Q14532 448 aa21.88■■□□□ 1.09
TRIM56-202ENST00000412507 DHX32Q7L7V1 743 aaKnown RBP21.88■■□□□ 1.09
TRIM56-202ENST00000412507 RNF180Q86T96 592 aa21.88■■□□□ 1.09
TRIM56-202ENST00000412507 RAB11FIP4Q86YS3 637 aa21.88■■□□□ 1.09
TRIM56-202ENST00000412507 KCNB2Q92953 911 aa21.88■■□□□ 1.09
TRIM56-202ENST00000412507 FERMT2Q96AC1 680 aa21.88■■□□□ 1.09
TRIM56-202ENST00000412507 PDGFCQ9NRA1 345 aa21.88■■□□□ 1.09
TRIM56-202ENST00000412507 KIF5BP33176 963 aa21.87■■□□□ 1.09
TRIM56-202ENST00000412507 IRX5P78411 483 aaPredicted RBP21.87■■□□□ 1.09
TRIM56-202ENST00000412507 TNFAIP2Q03169 654 aa21.87■■□□□ 1.09
TRIM56-202ENST00000412507 MCF2L2Q86YR7 1114 aa21.87■■□□□ 1.09
TRIM56-202ENST00000412507 PIBF1Q8WXW3 757 aa21.87■■□□□ 1.09
TRIM56-202ENST00000412507 PCDHA1Q9Y5I3 950 aa21.87■■□□□ 1.09
TRIM56-202ENST00000412507 SLC12A7Q9Y666 1083 aa21.87■■□□□ 1.09
TRIM56-202ENST00000412507 LOC102724159A0A0B4J2E5 919 aa21.86■■□□□ 1.09
TRIM56-202ENST00000412507 PWP2Q15269 919 aaKnown RBP21.86■■□□□ 1.09
TRIM56-202ENST00000412507 TAPT1Q6NXT6 567 aa21.86■■□□□ 1.09
TRIM56-202ENST00000412507 SGMS1Q86VZ5 419 aa21.86■■□□□ 1.09
TRIM56-202ENST00000412507 DNERQ8NFT8 737 aa21.86■■□□□ 1.09
TRIM56-202ENST00000412507 SYTL5Q8TDW5 730 aaPredicted RBP21.86■■□□□ 1.09
TRIM56-202ENST00000412507 MAF1Q9H063 256 aa21.86■■□□□ 1.09
TRIM56-202ENST00000412507 VTA1Q9NP79 307 aa21.86■■□□□ 1.09
TRIM56-202ENST00000412507 COL20A1Q9P218 1284 aa21.86■■□□□ 1.09
TRIM56-202ENST00000412507 PHF24Q9UPV7 400 aa21.86■■□□□ 1.09
TRIM56-202ENST00000412507 SNX14Q9Y5W7 946 aa21.86■■□□□ 1.09
TRIM56-202ENST00000412507 PNMA6FA0A0J9YX94 578 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 MYADML2A6NDP7 307 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 OPLAHO14841 1288 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 PLEKHA8P1O95397 391 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 CFBP00751 764 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 C6orf222P0C671 652 aaPredicted RBP21.85■■□□□ 1.09
TRIM56-202ENST00000412507 CALM1P0DP23 149 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 CALM2P0DP24 149 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 CALM3P0DP25 149 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 CPA1P15085 419 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 SLC39A5Q6ZMH5 540 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 NOL8Q76FK4 1167 aaKnown RBP21.85■■□□□ 1.09
TRIM56-202ENST00000412507 KLHDC9Q8NEP7 349 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 TAAR1Q96RJ0 339 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 SPZ1Q9BXG8 430 aa21.85■■□□□ 1.09
TRIM56-202ENST00000412507 ZMYND8Q9ULU4 1186 aaPredicted RBP21.85■■□□□ 1.09
TRIM56-202ENST00000412507 SMPD1P17405 629 aa21.84■■□□□ 1.09
TRIM56-202ENST00000412507 GJA9P57773 515 aa21.84■■□□□ 1.09
TRIM56-202ENST00000412507 PDE4DQ08499 809 aa21.84■■□□□ 1.09
TRIM56-202ENST00000412507 TMEM63BQ5T3F8 832 aa21.84■■□□□ 1.09
TRIM56-202ENST00000412507 MICU3Q86XE3 530 aa21.84■■□□□ 1.09
TRIM56-202ENST00000412507 CMTR1Q8N1G2 835 aaKnown RBP21.84■■□□□ 1.09
TRIM56-202ENST00000412507 SRBD1Q8N5C6 995 aaKnown RBP21.84■■□□□ 1.09
TRIM56-202ENST00000412507 JAKMIP1Q96N16 626 aaKnown RBP21.84■■□□□ 1.09
TRIM56-202ENST00000412507 MPHOSPH6Q99547 160 aaKnown RBP21.84■■□□□ 1.09
TRIM56-202ENST00000412507 UPF3AQ9H1J1 476 aaKnown RBP21.84■■□□□ 1.09
TRIM56-202ENST00000412507 SPC25Q9HBM1 224 aa21.84■■□□□ 1.09
TRIM56-202ENST00000412507 TRIOBPQ9H2D6 2365 aa21.84■■□□□ 1.09
TRIM56-202ENST00000412507 HMGB1P09429 215 aaKnown RBP21.83■■□□□ 1.09
TRIM56-202ENST00000412507 SYN1P17600 705 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 PTGS1P23219 599 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 EDNRBP24530 442 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 SMARCA1P28370 1054 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 GNAQP50148 359 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 RTP1P59025 263 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 TRAF1Q13077 416 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 KCNA10Q16322 511 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 IQSEC1Q6DN90 963 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 APOA5Q6Q788 366 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 SYNE3Q6ZMZ3 975 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 FANCBQ8NB91 859 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 LZTS2Q9BRK4 669 aa21.83■■□□□ 1.09
TRIM56-202ENST00000412507 TSEN34Q9BSV6 310 aaKnown RBP21.83■■□□□ 1.09
TRIM56-202ENST00000412507 COLQQ9Y215 455 aaPredicted RBP21.83■■□□□ 1.09
TRIM56-202ENST00000412507 GNEQ9Y223 722 aaKnown RBP21.83■■□□□ 1.09
TRIM56-202ENST00000412507 LTBP2Q14767 1821 aa21.83■■□□□ 1.08
TRIM56-202ENST00000412507 A0A1W2PQ45 241 aaPredicted RBP21.82■■□□□ 1.08
TRIM56-202ENST00000412507 A0A1W2PQY0 241 aa21.82■■□□□ 1.08
TRIM56-202ENST00000412507 B4DLN1 442 aa21.82■■□□□ 1.08
TRIM56-202ENST00000412507 CST5P28325 142 aaPredicted RBP21.82■■□□□ 1.08
TRIM56-202ENST00000412507 HSD17B4P51659 736 aa21.82■■□□□ 1.08
TRIM56-202ENST00000412507 MRPL12P52815 198 aaKnown RBP21.82■■□□□ 1.08
TRIM56-202ENST00000412507 ACLYP53396 1101 aa21.82■■□□□ 1.08
TRIM56-202ENST00000412507 CCSAPQ6IQ19 270 aaPredicted RBP21.82■■□□□ 1.08
TRIM56-202ENST00000412507 CHRDL2Q6WN34 429 aa21.82■■□□□ 1.08
TRIM56-202ENST00000412507 RRP36Q96EU6 259 aaKnown RBP21.82■■□□□ 1.08
TRIM56-202ENST00000412507 RMDN3Q96TC7 470 aa21.82■■□□□ 1.08
TRIM56-202ENST00000412507 BRPF3Q9ULD4 1205 aa21.82■■□□□ 1.08
TRIM56-202ENST00000412507 ATP11BQ9Y2G3 1177 aa21.82■■□□□ 1.08
TRIM56-202ENST00000412507 DOCK5Q9H7D0 1870 aa21.81■■□□□ 1.08
TRIM56-202ENST00000412507 CTAGE5O15320 804 aa21.81■■□□□ 1.08
TRIM56-202ENST00000412507 BEX3Q00994 111 aa21.81■■□□□ 1.08
TRIM56-202ENST00000412507 GHRHRQ02643 423 aa21.81■■□□□ 1.08
TRIM56-202ENST00000412507 GNASQ5JWF2 1037 aa21.81■■□□□ 1.08
TRIM56-202ENST00000412507 TLK2Q86UE8 772 aa21.81■■□□□ 1.08
TRIM56-202ENST00000412507 CCDC82Q8N4S0 544 aa21.81■■□□□ 1.08
TRIM56-202ENST00000412507 NSUN6Q8TEA1 469 aaKnown RBP21.81■■□□□ 1.08
TRIM56-202ENST00000412507 WDR11Q9BZH6 1224 aa21.81■■□□□ 1.08
TRIM56-202ENST00000412507 PCDH10Q9P2E7 1040 aa21.81■■□□□ 1.08
TRIM56-202ENST00000412507 RBM47A0AV96 593 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms