RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 UNC93B1Q9H1C4 597 aa16.12■□□□□ 0.17
CPNE1-206ENST00000412056 SLKQ9H2G2 1235 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-206ENST00000412056 PFKFB2O60825 505 aa16.11■□□□□ 0.17
CPNE1-206ENST00000412056 CFBP00751 764 aa16.11■□□□□ 0.17
CPNE1-206ENST00000412056 IFNAR1P17181 557 aa16.11■□□□□ 0.17
CPNE1-206ENST00000412056 TRAF1Q13077 416 aa16.11■□□□□ 0.17
CPNE1-206ENST00000412056 ME3Q16798 604 aa16.11■□□□□ 0.17
CPNE1-206ENST00000412056 MAP3K21Q5TCX8 1036 aa16.11■□□□□ 0.17
CPNE1-206ENST00000412056 WWC2Q6AWC2 1192 aa16.11■□□□□ 0.17
CPNE1-206ENST00000412056 HEATR3Q7Z4Q2 680 aa16.11■□□□□ 0.17
CPNE1-206ENST00000412056 MCF2L2Q86YR7 1114 aa16.11■□□□□ 0.17
CPNE1-206ENST00000412056 COL20A1Q9P218 1284 aa16.11■□□□□ 0.17
CPNE1-206ENST00000412056 DDX49Q9Y6V7 483 aaKnown RBP16.11■□□□□ 0.17
CPNE1-206ENST00000412056 KIAA1217Q5T5P2 1943 aa16.11■□□□□ 0.17
CPNE1-206ENST00000412056 CCDC85CA6NKD9 419 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 CPLX1O14810 134 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 DTNBO60941 627 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 CYBAP13498 195 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 CCL5P13501 91 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 HSD17B4P51659 736 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 GHRHRQ02643 423 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 TYW1BQ6NUM6 668 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 ZNF467Q7Z7K2 595 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-206ENST00000412056 NECAB1Q8N987 351 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 RGS22Q8NE09 1264 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 TRPV1Q8NER1 839 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 SYTL5Q8TDW5 730 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-206ENST00000412056 TINF2Q9BSI4 451 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 SLC26A6Q9BXS9 759 aa16.1■□□□□ 0.17
CPNE1-206ENST00000412056 RNF26Q9BY78 433 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-206ENST00000412056 STXBP3O00186 592 aa16.09■□□□□ 0.17
CPNE1-206ENST00000412056 PRPF3O43395 683 aaKnown RBP16.09■□□□□ 0.17
CPNE1-206ENST00000412056 CCND3P30281 292 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-206ENST00000412056 HOXA13P31271 388 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-206ENST00000412056 ALDH5A1P51649 535 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-206ENST00000412056 ST3GAL1Q11201 340 aa16.09■□□□□ 0.17
CPNE1-206ENST00000412056 PKN1Q16512 942 aa16.09■□□□□ 0.17
CPNE1-206ENST00000412056 PFKFB3Q16875 520 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-206ENST00000412056 PRAMEF19Q5SWL8 479 aa16.09■□□□□ 0.17
CPNE1-206ENST00000412056 MAMDC4Q6UXC1 1216 aa16.09■□□□□ 0.17
CPNE1-206ENST00000412056 ARMCX2Q7L311 632 aa16.09■□□□□ 0.17
CPNE1-206ENST00000412056 MAF1Q9H063 256 aa16.09■□□□□ 0.17
CPNE1-206ENST00000412056 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.09■□□□□ 0.176e-9■□□□□ 10.4
CPNE1-206ENST00000412056 RNF208Q9H0X6 261 aa16.09■□□□□ 0.17
CPNE1-206ENST00000412056 HTTP42858 3142 aa16.08■□□□□ 0.17
CPNE1-206ENST00000412056 CD2BP2O95400 341 aaKnown RBP16.08■□□□□ 0.16
CPNE1-206ENST00000412056 SNAI1O95863 264 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-206ENST00000412056 SCG2P13521 617 aa16.08■□□□□ 0.16
CPNE1-206ENST00000412056 NAPAP54920 295 aa16.08■□□□□ 0.16
CPNE1-206ENST00000412056 SSRP1Q08945 709 aaKnown RBP16.08■□□□□ 0.16
CPNE1-206ENST00000412056 CPLX2Q6PUV4 134 aaKnown RBP16.08■□□□□ 0.16
CPNE1-206ENST00000412056 MSL3Q8N5Y2 521 aaKnown RBP16.08■□□□□ 0.16
CPNE1-206ENST00000412056 GTF3C6Q969F1 213 aa16.08■□□□□ 0.16
CPNE1-206ENST00000412056 TAAR1Q96RJ0 339 aa16.08■□□□□ 0.16
CPNE1-206ENST00000412056 HMX1Q9NP08 348 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-206ENST00000412056 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-206ENST00000412056 RBM27Q9P2N5 1060 aaKnown RBP16.08■□□□□ 0.16
CPNE1-206ENST00000412056 LIMCH1Q9UPQ0 1083 aa16.08■□□□□ 0.16
CPNE1-206ENST00000412056 RPTORQ8N122 1335 aa16.08■□□□□ 0.16
CPNE1-206ENST00000412056 SYNGAP1Q96PV0 1343 aa16.08■□□□□ 0.16
CPNE1-206ENST00000412056 ASB14A6NK59 587 aa16.07■□□□□ 0.16
CPNE1-206ENST00000412056 GCOM1H8Y6P7 765 aaPredicted RBP16.07■□□□□ 0.16
CPNE1-206ENST00000412056 hCG_1984214I3L0E3 225 aa16.07■□□□□ 0.16
CPNE1-206ENST00000412056 CTDNEP1O95476 244 aa16.07■□□□□ 0.16
CPNE1-206ENST00000412056 POLR2MP0CAP2 368 aa16.07■□□□□ 0.16
CPNE1-206ENST00000412056 SOX10P56693 466 aa16.07■□□□□ 0.16
CPNE1-206ENST00000412056 AKAP17AQ02040 695 aaKnown RBP16.07■□□□□ 0.16
CPNE1-206ENST00000412056 FCHSD1Q86WN1 690 aa16.07■□□□□ 0.16
CPNE1-206ENST00000412056 TRIM22Q8IYM9 498 aa16.07■□□□□ 0.16
CPNE1-206ENST00000412056 SAMD3Q8N6K7 520 aa16.07■□□□□ 0.16
CPNE1-206ENST00000412056 ZNF713Q8N859 430 aaPredicted RBP16.07■□□□□ 0.16
CPNE1-206ENST00000412056 PAK6Q9NQU5 681 aaPredicted RBP16.07■□□□□ 0.16
CPNE1-206ENST00000412056 BARHL2Q9NY43 387 aa16.07■□□□□ 0.16
CPNE1-206ENST00000412056 ADD3Q9UEY8 706 aaKnown RBP16.07■□□□□ 0.16
CPNE1-206ENST00000412056 MYH7BA7E2Y1 1941 aa16.07■□□□□ 0.16
CPNE1-206ENST00000412056 POTEFA5A3E0 1075 aa16.06■□□□□ 0.16
CPNE1-206ENST00000412056 ST18O60284 1047 aa16.06■□□□□ 0.16
CPNE1-206ENST00000412056 PPP1R18Q6NYC8 613 aa16.06■□□□□ 0.16
CPNE1-206ENST00000412056 USP17L6PQ6QN14 398 aa16.06■□□□□ 0.16
CPNE1-206ENST00000412056 DNERQ8NFT8 737 aa16.06■□□□□ 0.16
CPNE1-206ENST00000412056 MORC4Q8TE76 937 aa16.06■□□□□ 0.16
CPNE1-206ENST00000412056 SHISA4Q96DD7 197 aa16.06■□□□□ 0.16
CPNE1-206ENST00000412056 TMEM106CQ9BVX2 250 aa16.06■□□□□ 0.16
CPNE1-206ENST00000412056 MAP3K20Q9NYL2 800 aaKnown RBP16.06■□□□□ 0.16
CPNE1-206ENST00000412056 ZHX1Q9UKY1 873 aaPredicted RBP16.06■□□□□ 0.16
CPNE1-206ENST00000412056 CNPY2Q9Y2B0 182 aa16.06■□□□□ 0.16
CPNE1-206ENST00000412056 STK36Q9NRP7 1315 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 MEIS2O14770 477 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 CAPN15O75808 1086 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 CDKL5O76039 1030 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 ZNF865P0CJ78 1059 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-206ENST00000412056 EIF2AK2P19525 551 aaKnown RBP16.05■□□□□ 0.16
CPNE1-206ENST00000412056 CNGA1P29973 690 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 UBE2SQ16763 222 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 EEPD1Q7L9B9 569 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 CCDC83Q8IWF9 413 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 FBXO16Q8IX29 292 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-206ENST00000412056 SMARCC2Q8TAQ2 1214 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 CUL5Q93034 780 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms