RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 DCP1AQ9NPI6 582 aaPredicted RBP8.3□□□□□ -1.08
LSM8-202ENST00000411938 POLR3EQ9NVU0 708 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 CTNNA3Q9UI47 895 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 Q9Y3F1 56 aa8.3□□□□□ -1.08
LSM8-202ENST00000411938 EP300Q09472 2414 aaPredicted RBP8.3□□□□□ -1.08
LSM8-202ENST00000411938 SOWAHBA6NEL2 793 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 USP17L12C9JPN9 530 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 USP17L21D6R901 530 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 GJB5O95377 273 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 CDK8P49336 464 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 CHMP4BP1P59074 171 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 NBPF20Q3BBV1 942 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 TIGD5Q53EQ6 642 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 TMEM63BQ5T3F8 832 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 TMED8Q6PL24 325 aaPredicted RBP8.29□□□□□ -1.08
LSM8-202ENST00000411938 TRIM67Q6ZTA4 783 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 KIAA1211Q6ZU35 1233 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 FBXO16Q8IX29 292 aaPredicted RBP8.29□□□□□ -1.08
LSM8-202ENST00000411938 FAM133AQ8N9E0 248 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 BANK1Q8NDB2 785 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 C17orf80Q9BSJ5 609 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 IRF2BPLQ9H1B7 796 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 CLDND1Q9NY35 253 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 TLR7Q9NYK1 1049 aaKnown RBP8.29□□□□□ -1.08
LSM8-202ENST00000411938 ZBTB47Q9UFB7 747 aaPredicted RBP8.29□□□□□ -1.08
LSM8-202ENST00000411938 DBNLQ9UJU6 430 aaKnown RBP8.29□□□□□ -1.08
LSM8-202ENST00000411938 COG6Q9Y2V7 657 aa8.29□□□□□ -1.08
LSM8-202ENST00000411938 DDX49Q9Y6V7 483 aaKnown RBP8.29□□□□□ -1.08
LSM8-202ENST00000411938 CYP2D7A0A087X1C5 515 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 NDUFB10O96000 172 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 GNAI2P04899 355 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 PURAQ00577 322 aaKnown RBP8.28□□□□□ -1.08
LSM8-202ENST00000411938 CLUL1Q15846 466 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 LRRFIP1Q32MZ4 808 aaKnown RBP8.28□□□□□ -1.08
LSM8-202ENST00000411938 TCEAL5Q5H9L2 206 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 SLC9C2Q5TAH2 1124 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 C20orf194Q5TEA3 1177 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 TAPT1Q6NXT6 567 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.28□□□□□ -1.08
LSM8-202ENST00000411938 AMOTL1Q8IY63 956 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 FBXL6Q8N531 539 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 DDRGK1Q96HY6 314 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 MTG1Q9BT17 334 aaPredicted RBP8.28□□□□□ -1.08
LSM8-202ENST00000411938 CCDC8Q9H0W5 538 aaPredicted RBP8.28□□□□□ -1.08
LSM8-202ENST00000411938 BCL11AQ9H165 835 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 ACAD9Q9H845 621 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 SLC38A10Q9HBR0 1119 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 CHD8Q9HCK8 2581 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 ACACBO00763 2458 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 USP34Q70CQ2 3546 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 NAV1Q8NEY1 1877 aa8.28□□□□□ -1.08
LSM8-202ENST00000411938 ABHD14A-ACY1A0A1B0GW23 586 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 F5H6K3 240 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 SURF6O75683 361 aaKnown RBP8.27□□□□□ -1.09
LSM8-202ENST00000411938 PDE6AP16499 860 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 CPT1AP50416 773 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 KLRC3Q07444 240 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 SMAD2Q15796 467 aaKnown RBP8.27□□□□□ -1.09
LSM8-202ENST00000411938 DUSP28Q4G0W2 176 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 BRDTQ58F21 947 aaPredicted RBP8.27□□□□□ -1.09
LSM8-202ENST00000411938 NFRKBQ6P4R8 1299 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 CNKSR3Q6P9H4 555 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 LCORLQ8N3X6 602 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 CCDC155Q8N6L0 562 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 A1CFQ9NQ94 594 aaKnown RBP8.27□□□□□ -1.09
LSM8-202ENST00000411938 RNF146Q9NTX7 359 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 ISY1Q9ULR0 285 aaKnown RBP8.27□□□□□ -1.09
LSM8-202ENST00000411938 INSL6Q9Y581 213 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 MYH8P13535 1937 aa8.27□□□□□ -1.09
LSM8-202ENST00000411938 TRIP12Q14669 1992 aaPredicted RBP8.26□□□□□ -1.09
LSM8-202ENST00000411938 SPTBN2O15020 2390 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 H0Y858 1186 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 STXBP3O00186 592 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 NCK2O43639 380 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 PRKAB2O43741 272 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 EFCAB14O75071 495 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 SELPP16109 830 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 ID4P47928 161 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 OAZ1P54368 228 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 GPM6BQ13491 265 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 IKBKEQ14164 716 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 PTGISQ16647 500 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 EPC2Q52LR7 807 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 C12orf60Q5U649 245 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 C16orf86Q6ZW13 317 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 LRRC8DQ7L1W4 858 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 RPAINQ86UA6 219 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 OR6J1Q8NGC5 347 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 AFAP1L1Q8TED9 768 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 WDR11Q9BZH6 1224 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 NSUN3Q9H649 340 aaKnown RBP8.26□□□□□ -1.09
LSM8-202ENST00000411938 ARMT1Q9H993 441 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 VTA1Q9NP79 307 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 TLR9Q9NR96 1032 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 FEM1BQ9UK73 627 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 TRPC6Q9Y210 931 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 ZNF532Q9HCE3 1301 aa8.26□□□□□ -1.09
LSM8-202ENST00000411938 PTPRSQ13332 1948 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 SIP14410 1827 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 MBTPS2O43462 519 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms