RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 RANBP17Q9H2T7 1088 aaKnown RBP16.83■□□□□ 0.28
HLA-DQB2-229ENST00000411527 TOMM22Q9NS69 142 aa16.83■□□□□ 0.28
HLA-DQB2-229ENST00000411527 ADD3Q9UEY8 706 aaKnown RBP16.83■□□□□ 0.28
HLA-DQB2-229ENST00000411527 ANAPC4Q9UJX5 808 aa16.83■□□□□ 0.28
HLA-DQB2-229ENST00000411527 PTPDC1A2A3K4 754 aa16.82■□□□□ 0.28
HLA-DQB2-229ENST00000411527 ZBBXA8MT70 800 aa16.82■□□□□ 0.28
HLA-DQB2-229ENST00000411527 NOVP48745 357 aa16.82■□□□□ 0.28
HLA-DQB2-229ENST00000411527 ALDH5A1P51649 535 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB2-229ENST00000411527 WDR11Q9BZH6 1224 aa16.82■□□□□ 0.28
HLA-DQB2-229ENST00000411527 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
HLA-DQB2-229ENST00000411527 POLR3EQ9NVU0 708 aa16.82■□□□□ 0.28
HLA-DQB2-229ENST00000411527 TTC28Q96AY4 2481 aa16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 NFIBO00712 420 aa16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 ORC4O43929 436 aa16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 MYL3P08590 195 aa16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 SUPT20HL2P0C7V6 817 aa16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 CYP2C9P11712 490 aa16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 MYOGP15173 224 aa16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 MRPS5P82675 430 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 SYDE2Q5VT97 1194 aa16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 BTNL9Q6UXG8 535 aa16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 TRMT13Q9NUP7 481 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 PCDHA11Q9Y5I1 949 aa16.81■□□□□ 0.28
HLA-DQB2-229ENST00000411527 TNKSO95271 1327 aa16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 FRMPD2Q68DX3 1309 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 FGRP09769 529 aa16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 TOP1P11387 765 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 CALML3P27482 149 aa16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 CPT1AP50416 773 aa16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 PURAQ00577 322 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 ALX1Q15699 326 aa16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 RRP12Q5JTH9 1297 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 PPP2R2DQ66LE6 453 aa16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 VWCEQ96DN2 955 aa16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 TMEM47Q9BQJ4 181 aa16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 GPHNQ9NQX3 736 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 ZBTB47Q9UFB7 747 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQB2-229ENST00000411527 SCN5AQ14524 2016 aa16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 LOC102724159A0A0B4J2E5 919 aa16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 RBM47A0AV96 593 aaKnown RBP16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 ATP2A2P16615 1042 aaKnown RBP16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 TTLL4Q14679 1199 aa16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 PWP2Q15269 919 aaKnown RBP16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 FAM47CQ5HY64 1035 aa16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 SLC30A10Q6XR72 485 aa16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 DEFB128Q7Z7B8 93 aa16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 OR6J1Q8NGC5 347 aa16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 ADAMTS19Q8TE59 1207 aa16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 EVI5LQ96CN4 794 aa16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 MTG1Q9BT17 334 aaPredicted RBP16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 HELLSQ9NRZ9 838 aa16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 CHD9Q3L8U1 2897 aa16.79■□□□□ 0.28
HLA-DQB2-229ENST00000411527 SALL3Q9BXA9 1300 aa16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 FGAP02671 866 aa16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 PFKMP08237 780 aa16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 PDE4DQ08499 809 aa16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 NBPF20Q3BBV1 942 aa16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 ANKRD45Q5TZF3 282 aa16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 RNF207Q6ZRF8 634 aa16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 MICALL1Q8N3F8 863 aa16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 IL27Q8NEV9 243 aa16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 CLEC4DQ8WXI8 215 aa16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 TSPYL2Q9H2G4 693 aaPredicted RBP16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 TCP11L1Q9NUJ3 509 aa16.78■□□□□ 0.28
HLA-DQB2-229ENST00000411527 COL9A1P20849 921 aa16.77■□□□□ 0.28
HLA-DQB2-229ENST00000411527 BRDTQ58F21 947 aaPredicted RBP16.77■□□□□ 0.28
HLA-DQB2-229ENST00000411527 PPP1R13LQ8WUF5 828 aa16.77■□□□□ 0.28
HLA-DQB2-229ENST00000411527 MPHOSPH6Q99547 160 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB2-229ENST00000411527 NKRFO15226 690 aaKnown RBP eCLIP16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 PDHBP11177 359 aa16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 ACTN1P12814 892 aa16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 RPS6P62753 249 aaKnown RBP16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 PPP2R5BQ15173 497 aa16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 MCMDC2Q4G0Z9 681 aa16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 TMEM67Q5HYA8 995 aa16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 RETREG2Q8NC44 543 aa16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 COPS5Q92905 334 aa16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 FAM227BQ96M60 508 aa16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 UHRF1Q96T88 793 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 PNMA2Q9UL42 364 aa16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 TCF20Q9UGU0 1960 aaKnown RBP16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 SCN10AQ9Y5Y9 1956 aa16.76■□□□□ 0.27
HLA-DQB2-229ENST00000411527 RAD50Q92878 1312 aa16.75■□□□□ 0.27
HLA-DQB2-229ENST00000411527 A0A0D9SFI3 127 aa16.75■□□□□ 0.27
HLA-DQB2-229ENST00000411527 KPNA6O60684 536 aa16.75■□□□□ 0.27
HLA-DQB2-229ENST00000411527 TXNP10599 105 aaKnown RBP16.75■□□□□ 0.27
HLA-DQB2-229ENST00000411527 HAND2P61296 217 aa16.75■□□□□ 0.27
HLA-DQB2-229ENST00000411527 ZNF543Q08ER8 600 aa16.75■□□□□ 0.27
HLA-DQB2-229ENST00000411527 NFRKBQ6P4R8 1299 aa16.75■□□□□ 0.27
HLA-DQB2-229ENST00000411527 DNERQ8NFT8 737 aa16.75■□□□□ 0.27
HLA-DQB2-229ENST00000411527 SCFD2Q8WU76 684 aa16.75■□□□□ 0.27
HLA-DQB2-229ENST00000411527 TTC14Q96N46 770 aa16.75■□□□□ 0.27
HLA-DQB2-229ENST00000411527 A6NJR5 290 aa16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 B4DLN1 442 aa16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 RFXAPO00287 272 aa16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 CA3P07451 260 aa16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 HSPD1P10809 573 aaKnown RBP16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 EDNRBP24530 442 aa16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 RFC2P35250 354 aa16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 MRPL12P52815 198 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms