RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 MCF2L2Q86YR7 1114 aa27.59■■■□□ 2.01
UBE2E3-202ENST00000410062 RGS22Q8NE09 1264 aa27.59■■■□□ 2.01
UBE2E3-202ENST00000410062 DDX49Q9Y6V7 483 aaKnown RBP27.59■■■□□ 2.01
UBE2E3-202ENST00000410062 MCM3APO60318 1980 aa27.58■■■□□ 2.01
UBE2E3-202ENST00000410062 CCDC196A0A1B0GTZ2 297 aa27.58■■■□□ 2.01
UBE2E3-202ENST00000410062 EN2P19622 333 aaPredicted RBP27.58■■■□□ 2.01
UBE2E3-202ENST00000410062 CNGA1P29973 690 aa27.58■■■□□ 2.01
UBE2E3-202ENST00000410062 NEK4P51957 841 aa27.58■■■□□ 2.01
UBE2E3-202ENST00000410062 TRAF1Q13077 416 aa27.58■■■□□ 2.01
UBE2E3-202ENST00000410062 MSL3Q8N5Y2 521 aaKnown RBP27.58■■■□□ 2.01
UBE2E3-202ENST00000410062 NCOA5Q9HCD5 579 aaKnown RBP27.58■■■□□ 2.01
UBE2E3-202ENST00000410062 CFBP00751 764 aa27.57■■■□□ 2
UBE2E3-202ENST00000410062 AK2P54819 239 aa27.57■■■□□ 2
UBE2E3-202ENST00000410062 ZNF274Q96GC6 653 aaPredicted RBP27.57■■■□□ 2
UBE2E3-202ENST00000410062 ALDH8A1Q9H2A2 487 aaPredicted RBP27.57■■■□□ 2
UBE2E3-202ENST00000410062 SYNGAP1Q96PV0 1343 aa27.57■■■□□ 2
UBE2E3-202ENST00000410062 SNAI1O95863 264 aaPredicted RBP27.56■■■□□ 2
UBE2E3-202ENST00000410062 STK3Q13188 491 aa27.56■■■□□ 2
UBE2E3-202ENST00000410062 ARMCX2Q7L311 632 aa27.56■■■□□ 2
UBE2E3-202ENST00000410062 U2AF1L4Q8WU68 220 aaKnown RBP27.56■■■□□ 2
UBE2E3-202ENST00000410062 KIF2CQ99661 725 aa27.56■■■□□ 2
UBE2E3-202ENST00000410062 UPF2Q9HAU5 1272 aaKnown RBP27.56■■■□□ 2
UBE2E3-202ENST00000410062 V9GY48 417 aaPredicted RBP27.56■■■□□ 2
UBE2E3-202ENST00000410062 GJA8P48165 433 aa27.56■■■□□ 2
UBE2E3-202ENST00000410062 RBM25P49756 843 aaKnown RBP27.56■■■□□ 2
UBE2E3-202ENST00000410062 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.56■■■□□ 2
UBE2E3-202ENST00000410062 CNPY2Q9Y2B0 182 aa27.56■■■□□ 2
UBE2E3-202ENST00000410062 SGPL1O95470 568 aa27.55■■■□□ 2
UBE2E3-202ENST00000410062 ALDH5A1P51649 535 aaPredicted RBP27.55■■■□□ 2
UBE2E3-202ENST00000410062 NOL8Q76FK4 1167 aaKnown RBP27.55■■■□□ 2
UBE2E3-202ENST00000410062 SYTL5Q8TDW5 730 aaPredicted RBP27.55■■■□□ 2
UBE2E3-202ENST00000410062 COL20A1Q9P218 1284 aa27.55■■■□□ 2
UBE2E3-202ENST00000410062 ADD3Q9UEY8 706 aaKnown RBP27.55■■■□□ 2
UBE2E3-202ENST00000410062 TPCN1Q9ULQ1 816 aa27.55■■■□□ 2
UBE2E3-202ENST00000410062 MKI67P46013 3256 aaKnown RBP27.55■■■□□ 2
UBE2E3-202ENST00000410062 ASB14A6NK59 587 aa27.54■■■□□ 2
UBE2E3-202ENST00000410062 PPFIA3O75145 1194 aa27.54■■■□□ 2
UBE2E3-202ENST00000410062 GPKOWQ92917 476 aaPredicted RBP eCLIP27.54■■■□□ 2
UBE2E3-202ENST00000410062 SHISA4Q96DD7 197 aa27.54■■■□□ 2
UBE2E3-202ENST00000410062 HOXA13P31271 388 aaPredicted RBP27.53■■■□□ 2
UBE2E3-202ENST00000410062 HSD17B4P51659 736 aa27.53■■■□□ 2
UBE2E3-202ENST00000410062 ANKRD1Q15327 319 aa27.53■■■□□ 2
UBE2E3-202ENST00000410062 HEATR3Q7Z4Q2 680 aa27.53■■■□□ 2
UBE2E3-202ENST00000410062 TAAR1Q96RJ0 339 aa27.53■■■□□ 2
UBE2E3-202ENST00000410062 MAF1Q9H063 256 aa27.53■■■□□ 2
UBE2E3-202ENST00000410062 NRBP1Q9UHY1 535 aa27.53■■■□□ 2
UBE2E3-202ENST00000410062 ZNF865P0CJ78 1059 aaPredicted RBP27.52■■■□□ 2
UBE2E3-202ENST00000410062 NTRK3Q16288 839 aa27.52■■■□□ 2
UBE2E3-202ENST00000410062 PHKBQ93100 1093 aa27.52■■■□□ 2
UBE2E3-202ENST00000410062 ZHX1Q9UKY1 873 aaPredicted RBP27.52■■■□□ 2
UBE2E3-202ENST00000410062 TFRCP02786 760 aaKnown RBP27.52■■■□□ 2
UBE2E3-202ENST00000410062 GHRHRQ02643 423 aa27.52■■■□□ 2
UBE2E3-202ENST00000410062 ACVR2BQ13705 512 aa27.52■■■□□ 2
UBE2E3-202ENST00000410062 ANO1Q5XXA6 986 aa27.52■■■□□ 2
UBE2E3-202ENST00000410062 LHX8Q68G74 356 aa27.52■■■□□ 2
UBE2E3-202ENST00000410062 WWC2Q6AWC2 1192 aa27.52■■■□□ 2
UBE2E3-202ENST00000410062 BACH2Q9BYV9 841 aa27.52■■■□□ 2
UBE2E3-202ENST00000410062 DDX20Q9UHI6 824 aaKnown RBP27.52■■■□□ 2
UBE2E3-202ENST00000410062 GCOM1H8Y6P7 765 aaPredicted RBP27.51■■□□□ 1.99
UBE2E3-202ENST00000410062 SEPT4O43236 478 aa27.51■■□□□ 1.99
UBE2E3-202ENST00000410062 POLR2MP0CAP2 368 aa27.51■■□□□ 1.99
UBE2E3-202ENST00000410062 DNERQ8NFT8 737 aa27.51■■□□□ 1.99
UBE2E3-202ENST00000410062 CRISPLD2Q9H0B8 497 aa27.51■■□□□ 1.99
UBE2E3-202ENST00000410062 ABHD16BQ9H3Z7 469 aa27.51■■□□□ 1.99
UBE2E3-202ENST00000410062 EEPD1Q7L9B9 569 aa27.5■■□□□ 1.99
UBE2E3-202ENST00000410062 KATNBL1Q9H079 304 aa27.5■■□□□ 1.99
UBE2E3-202ENST00000410062 SLKQ9H2G2 1235 aaPredicted RBP27.5■■□□□ 1.99
UBE2E3-202ENST00000410062 MAP3K20Q9NYL2 800 aaKnown RBP27.5■■□□□ 1.99
UBE2E3-202ENST00000410062 IFNAR1P17181 557 aa27.49■■□□□ 1.99
UBE2E3-202ENST00000410062 SCRN1Q12765 414 aa27.49■■□□□ 1.99
UBE2E3-202ENST00000410062 MORC4Q8TE76 937 aa27.49■■□□□ 1.99
UBE2E3-202ENST00000410062 RMDN3Q96TC7 470 aa27.49■■□□□ 1.99
UBE2E3-202ENST00000410062 CPLX1O14810 134 aa27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 FCHSD1Q86WN1 690 aa27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 SAMD3Q8N6K7 520 aa27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 SLC26A6Q9BXS9 759 aa27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 FRMPD3Q5JV73 1810 aa27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 LRRC37A2A6NM11 1700 aa27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 PRPF3O43395 683 aaKnown RBP27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 MSCO60682 206 aa27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 PFKFB2O60825 505 aa27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 LARGE1O95461 756 aa27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 PFKFB3Q16875 520 aaPredicted RBP27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 TYW1BQ6NUM6 668 aa27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 FBXO16Q8IX29 292 aaPredicted RBP27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 NSUN6Q8TEA1 469 aaKnown RBP27.48■■□□□ 1.99
UBE2E3-202ENST00000410062 LOC102724159A0A0B4J2E5 919 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 AKR1A1P14550 325 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 EIF2AK2P19525 551 aaKnown RBP27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 NAPAP54920 295 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 AKAP17AQ02040 695 aaKnown RBP27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 PDE4DQ08499 809 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 PWP2Q15269 919 aaKnown RBP27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 PKN1Q16512 942 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 ME3Q16798 604 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 CCDC144BQ3MJ40 725 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 ARHGEF16Q5VV41 709 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 USP17L6PQ6QN14 398 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 LENG1Q96BZ8 264 aaPredicted RBP27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 TBC1D32Q96NH3 1257 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms