RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SLC27A2O14975 620 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 NKX3-2P78367 333 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 TLE2Q04725 743 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 TROAPQ12815 778 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 GRM4Q14833 912 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 TMEM67Q5HYA8 995 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 GNASQ5JWF2 1037 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 FBXO11Q86XK2 927 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 MTMR8Q96EF0 704 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 VTA1Q9NP79 307 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 ANO2Q9NQ90 1003 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 GPHNQ9NQX3 736 aaPredicted RBP20.64■□□□□ 0.89
LSM5-204ENST00000409909 MYH6P13533 1939 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 LOC102724159A0A0B4J2E5 919 aa20.63■□□□□ 0.89
LSM5-204ENST00000409909 PPP1R11O60927 126 aaPredicted RBP20.63■□□□□ 0.89
LSM5-204ENST00000409909 ASGR1P07306 291 aa20.63■□□□□ 0.89
LSM5-204ENST00000409909 BEX3Q00994 111 aa20.63■□□□□ 0.89
LSM5-204ENST00000409909 SART3Q15020 963 aaKnown RBP20.63■□□□□ 0.89
LSM5-204ENST00000409909 PWP2Q15269 919 aaKnown RBP20.63■□□□□ 0.89
LSM5-204ENST00000409909 CREB3L3Q68CJ9 461 aa20.63■□□□□ 0.89
LSM5-204ENST00000409909 IQSEC1Q6DN90 963 aa20.63■□□□□ 0.89
LSM5-204ENST00000409909 NOL8Q76FK4 1167 aaKnown RBP20.63■□□□□ 0.89
LSM5-204ENST00000409909 SH3RF1Q7Z6J0 888 aa20.63■□□□□ 0.89
LSM5-204ENST00000409909 SPC25Q9HBM1 224 aa20.63■□□□□ 0.89
LSM5-204ENST00000409909 BAZ2BQ9UIF8 2168 aaKnown RBP20.63■□□□□ 0.89
LSM5-204ENST00000409909 EDNRBP24530 442 aa20.62■□□□□ 0.89
LSM5-204ENST00000409909 PCSK9Q8NBP7 692 aaKnown RBP20.62■□□□□ 0.89
LSM5-204ENST00000409909 DNERQ8NFT8 737 aa20.62■□□□□ 0.89
LSM5-204ENST00000409909 NUP133Q8WUM0 1156 aa20.62■□□□□ 0.89
LSM5-204ENST00000409909 UBE2OQ9C0C9 1292 aaKnown RBP20.62■□□□□ 0.89
LSM5-204ENST00000409909 LY9Q9HBG7 655 aa20.62■□□□□ 0.89
LSM5-204ENST00000409909 STARD7Q9NQZ5 370 aa20.62■□□□□ 0.89
LSM5-204ENST00000409909 PDLIM7Q9NR12 457 aa20.62■□□□□ 0.89
LSM5-204ENST00000409909 TRIM43BA6NCK2 446 aa20.61■□□□□ 0.89
LSM5-204ENST00000409909 SOX1O00570 391 aaPredicted RBP20.61■□□□□ 0.89
LSM5-204ENST00000409909 OPLAHO14841 1288 aa20.61■□□□□ 0.89
LSM5-204ENST00000409909 DYNC1LI2O43237 492 aaPredicted RBP20.61■□□□□ 0.89
LSM5-204ENST00000409909 PRC1O43663 620 aa20.61■□□□□ 0.89
LSM5-204ENST00000409909 TLK2Q86UE8 772 aa20.61■□□□□ 0.89
LSM5-204ENST00000409909 SYTL5Q8TDW5 730 aaPredicted RBP20.61■□□□□ 0.89
LSM5-204ENST00000409909 TRIM43Q96BQ3 446 aaPredicted RBP20.61■□□□□ 0.89
LSM5-204ENST00000409909 RIOX1Q9H6W3 641 aa20.61■□□□□ 0.89
LSM5-204ENST00000409909 COL20A1Q9P218 1284 aa20.61■□□□□ 0.89
LSM5-204ENST00000409909 PRKAG2Q9UGJ0 569 aa20.61■□□□□ 0.89
LSM5-204ENST00000409909 LTBP2Q14767 1821 aa20.6■□□□□ 0.89
LSM5-204ENST00000409909 ELP1O95163 1332 aa20.6■□□□□ 0.89
LSM5-204ENST00000409909 RBM47A0AV96 593 aaKnown RBP20.6■□□□□ 0.89
LSM5-204ENST00000409909 ZBTB5O15062 677 aa20.6■□□□□ 0.89
LSM5-204ENST00000409909 CYTH3O43739 400 aa20.6■□□□□ 0.89
LSM5-204ENST00000409909 PQBP1O60828 265 aaKnown RBP20.6■□□□□ 0.89
LSM5-204ENST00000409909 PDE4DQ08499 809 aa20.6■□□□□ 0.89
LSM5-204ENST00000409909 CATIPQ7Z7H3 387 aa20.6■□□□□ 0.89
LSM5-204ENST00000409909 TAAR1Q96RJ0 339 aa20.6■□□□□ 0.89
LSM5-204ENST00000409909 AMNQ9BXJ7 453 aa20.6■□□□□ 0.89
LSM5-204ENST00000409909 MAF1Q9H063 256 aa20.6■□□□□ 0.89
LSM5-204ENST00000409909 PRDM5Q9NQX1 630 aaPredicted RBP20.6■□□□□ 0.89
LSM5-204ENST00000409909 MRPL11Q9Y3B7 192 aaKnown RBP20.6■□□□□ 0.89
LSM5-204ENST00000409909 Q9Y3F1 56 aa20.6■□□□□ 0.89
LSM5-204ENST00000409909 CDC45O75419 566 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 MCM5P33992 734 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 FSCN1Q16658 493 aaKnown RBP20.59■□□□□ 0.89
LSM5-204ENST00000409909 DUSP28Q4G0W2 176 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 ANKRD33Q7Z3H0 272 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 MCF2L2Q86YR7 1114 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 TDHQ8IZJ6 230 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 GLT1D1Q96MS3 346 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 PIGSQ96S52 555 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 LBHD1Q9BQE6 289 aaPredicted RBP20.59■□□□□ 0.89
LSM5-204ENST00000409909 MTA3Q9BTC8 594 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 MYL10Q9BUA6 226 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 WDR11Q9BZH6 1224 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 AP5M1Q9H0R1 490 aa20.59■□□□□ 0.89
LSM5-204ENST00000409909 SH2B2O14492 632 aaPredicted RBP20.58■□□□□ 0.89
LSM5-204ENST00000409909 ITGB8P26012 769 aa20.58■□□□□ 0.89
LSM5-204ENST00000409909 CDK7P50613 346 aa20.58■□□□□ 0.89
LSM5-204ENST00000409909 FAAP100Q0VG06 881 aa20.58■□□□□ 0.89
LSM5-204ENST00000409909 CASC1Q6TDU7 716 aa20.58■□□□□ 0.89
LSM5-204ENST00000409909 HOMER1Q86YM7 354 aa20.58■□□□□ 0.89
LSM5-204ENST00000409909 ZNF654Q8IZM8 581 aa20.58■□□□□ 0.89
LSM5-204ENST00000409909 VTI1AQ96AJ9 217 aa20.58■□□□□ 0.89
LSM5-204ENST00000409909 TOX2Q96NM4 488 aa20.58■□□□□ 0.89
LSM5-204ENST00000409909 PCDHA1Q9Y5I3 950 aa20.58■□□□□ 0.89
LSM5-204ENST00000409909 CLTBP09497 229 aa20.57■□□□□ 0.88
LSM5-204ENST00000409909 CXCL17Q6UXB2 119 aa20.57■□□□□ 0.88
LSM5-204ENST00000409909 BADQ92934 168 aa20.57■□□□□ 0.88
LSM5-204ENST00000409909 CFBP00751 764 aa20.56■□□□□ 0.88
LSM5-204ENST00000409909 HSD17B4P51659 736 aa20.56■□□□□ 0.88
LSM5-204ENST00000409909 GHRHRQ02643 423 aa20.56■□□□□ 0.88
LSM5-204ENST00000409909 NSUN6Q8TEA1 469 aaKnown RBP20.56■□□□□ 0.88
LSM5-204ENST00000409909 LRCH3Q96II8 777 aa20.56■□□□□ 0.88
LSM5-204ENST00000409909 TMEM87BQ96K49 555 aa20.56■□□□□ 0.88
LSM5-204ENST00000409909 RMDN3Q96TC7 470 aa20.56■□□□□ 0.88
LSM5-204ENST00000409909 MPHOSPH6Q99547 160 aaKnown RBP20.56■□□□□ 0.88
LSM5-204ENST00000409909 MAP3K14Q99558 947 aa20.56■□□□□ 0.88
LSM5-204ENST00000409909 LRRC2Q9BYS8 371 aa20.56■□□□□ 0.88
LSM5-204ENST00000409909 PNMA6FA0A0J9YX94 578 aa20.55■□□□□ 0.88
LSM5-204ENST00000409909 A0A0U1RQG5 324 aaPredicted RBP20.55■□□□□ 0.88
LSM5-204ENST00000409909 DCDC2CA8MYV0 355 aa20.55■□□□□ 0.88
LSM5-204ENST00000409909 B4DLN1 442 aa20.55■□□□□ 0.88
LSM5-204ENST00000409909 ARVCFO00192 962 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms