RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 MCM3P25205 808 aa16.65■□□□□ 0.26
TTC7A-204ENST00000409825 TKFCQ3LXA3 575 aa16.65■□□□□ 0.26
TTC7A-204ENST00000409825 EP400NLQ6ZTU2 488 aa16.65■□□□□ 0.26
TTC7A-204ENST00000409825 NSUN7Q8NE18 718 aaKnown RBP16.65■□□□□ 0.26
TTC7A-204ENST00000409825 NUB1Q9Y5A7 615 aa16.65■□□□□ 0.26
TTC7A-204ENST00000409825 PABPN1LA6NDY0 278 aaKnown RBP16.64■□□□□ 0.25
TTC7A-204ENST00000409825 JAK3P52333 1124 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 CCDC84Q86UT8 332 aaPredicted RBP16.64■□□□□ 0.25
TTC7A-204ENST00000409825 CLSTN2Q9H4D0 955 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
TTC7A-204ENST00000409825 NYAP2Q9P242 653 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 TACC1O75410 805 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 URI1O94763 535 aaPredicted RBP16.64■□□□□ 0.25
TTC7A-204ENST00000409825 GAP43P17677 238 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 TRIM14Q14142 442 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 FAM26FQ5R3K3 315 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 RASGRP4Q8TDF6 673 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 HOXA13P31271 388 aaPredicted RBP16.64■□□□□ 0.25
TTC7A-204ENST00000409825 RNF34Q969K3 372 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 TBC1D22BQ9NU19 505 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 POLLQ9UGP5 575 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 ZBTB24O43167 697 aaPredicted RBP16.64■□□□□ 0.25
TTC7A-204ENST00000409825 N4BP1O75113 896 aaKnown RBP16.64■□□□□ 0.25
TTC7A-204ENST00000409825 TMEM191BP0C7N4 346 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 LIN9Q5TKA1 542 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 USP28Q96RU2 1077 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 SELENOOQ9BVL4 669 aa16.64■□□□□ 0.25
TTC7A-204ENST00000409825 GBA2Q9HCG7 927 aaPredicted RBP16.64■□□□□ 0.25
TTC7A-204ENST00000409825 MMP1P03956 469 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 MYL3P08590 195 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 KIAA0753Q2KHM9 967 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 Q3C1V9 767 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 KCNV1Q6PIU1 500 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 PANK4Q9NVE7 773 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 KRT86O43790 486 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 EIF3JO75822 258 aaKnown RBP16.63■□□□□ 0.25
TTC7A-204ENST00000409825 TNFAIP3P21580 790 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 ARMCX5Q6P1M9 558 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 BRD1O95696 1058 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 CMA1P23946 247 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 GTF2A2P52657 109 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 GRM4Q14833 912 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 ENAHQ8N8S7 591 aaPredicted RBP16.63■□□□□ 0.25
TTC7A-204ENST00000409825 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.63■□□□□ 0.25
TTC7A-204ENST00000409825 DDX12PQ92771 950 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 SERTAD1Q9UHV2 236 aa16.63■□□□□ 0.25
TTC7A-204ENST00000409825 ELMSAN1Q6PJG2 1045 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 JADE2Q9NQC1 790 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 HNRNPDLO14979 420 aaKnown RBP16.62■□□□□ 0.25
TTC7A-204ENST00000409825 PTGS1P23219 599 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 HOXA10P31260 410 aaPredicted RBP16.62■□□□□ 0.25
TTC7A-204ENST00000409825 METTL14Q9HCE5 456 aaKnown RBP16.62■□□□□ 0.25
TTC7A-204ENST00000409825 GTPBP6O43824 516 aaPredicted RBP16.62■□□□□ 0.25
TTC7A-204ENST00000409825 SLC25A27O95847 323 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 KRT76Q01546 638 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 RASSF7Q02833 373 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 MTMR1Q13613 665 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 UBE2SQ16763 222 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 GPC2Q8N158 579 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 STAMQ92783 540 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 NUP58Q9BVL2 599 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 STK17AQ9UEE5 414 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 PPP4CP60510 307 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 ZSCAN30Q86W11 494 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 MXD3Q9BW11 206 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 MTMR6Q9Y217 621 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 COMMD10Q9Y6G5 202 aa16.62■□□□□ 0.25
TTC7A-204ENST00000409825 PCDHA6Q9UN73 950 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 PCDHA8Q9Y5H6 950 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 MAP9Q49MG5 647 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 ERO1BQ86YB8 467 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 TCP11Q8WWU5 503 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 NLRP7Q8WX94 980 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 LARP4BQ92615 738 aaKnown RBP16.61■□□□□ 0.25
TTC7A-204ENST00000409825 PSMD1Q99460 953 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 ZSWIM4Q9H7M6 989 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 VCPKMTQ9H867 229 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 PXDNQ92626 1479 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 XRCC5P13010 732 aaKnown RBP16.61■□□□□ 0.25
TTC7A-204ENST00000409825 CYP2J2P51589 502 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 RNASELQ05823 741 aaKnown RBP16.61■□□□□ 0.25
TTC7A-204ENST00000409825 CCDC97Q96F63 343 aaPredicted RBP16.61■□□□□ 0.25
TTC7A-204ENST00000409825 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 TMEM39BQ9GZU3 492 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
TTC7A-204ENST00000409825 DDR1Q08345 913 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 QRICH1Q2TAL8 776 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 MTERF2Q49AM1 385 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 PLCD3Q8N3E9 789 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.61■□□□□ 0.25
TTC7A-204ENST00000409825 CENPHQ9H3R5 247 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 MTMR4Q9NYA4 1195 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 PHLPP2Q6ZVD8 1323 aa16.61■□□□□ 0.25
TTC7A-204ENST00000409825 SNAP25P60880 206 aa16.6■□□□□ 0.25
TTC7A-204ENST00000409825 SCYL3Q8IZE3 742 aa16.6■□□□□ 0.25
TTC7A-204ENST00000409825 ZDHHC15Q96MV8 337 aa16.6■□□□□ 0.25
TTC7A-204ENST00000409825 NEDD4P46934 1319 aa16.6■□□□□ 0.25
TTC7A-204ENST00000409825 PFKFB1P16118 471 aa16.6■□□□□ 0.25
TTC7A-204ENST00000409825 ZNF827Q17R98 1081 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms