RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 OLFM4Q6UX06 510 aa8.52□□□□□ -1.05
CXCR4-202ENST00000409817 ZMYND12Q9H0C1 365 aa8.52□□□□□ -1.05
CXCR4-202ENST00000409817 COL2A1P02458 1487 aaPredicted RBP8.52□□□□□ -1.05
CXCR4-202ENST00000409817 M0R2N6 131 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 STXBP3O00186 592 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 POLR2DO15514 142 aaKnown RBP8.51□□□□□ -1.05
CXCR4-202ENST00000409817 CYTH3O43739 400 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 NEMFO60524 1076 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 SMC2O95347 1197 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 LONP1P36776 959 aaKnown RBP8.51□□□□□ -1.05
CXCR4-202ENST00000409817 BAG6P46379 1132 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 SF3B2Q13435 895 aaKnown RBP8.51□□□□□ -1.05
CXCR4-202ENST00000409817 POSTNQ15063 836 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 DPCR1Q3MIW9 517 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 EARS2Q5JPH6 523 aaKnown RBP8.51□□□□□ -1.05
CXCR4-202ENST00000409817 GPATCH4Q5T3I0 446 aaKnown RBP8.51□□□□□ -1.05
CXCR4-202ENST00000409817 PIK3AP1Q6ZUJ8 805 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 KRT25Q7Z3Z0 450 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 METTL16Q86W50 562 aaKnown RBP8.51□□□□□ -1.05
CXCR4-202ENST00000409817 RTKN2Q8IZC4 609 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 AOPEPQ8N6M6 819 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 CSRNP2Q9H175 543 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 RIOX1Q9H6W3 641 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 DBNDD1Q9H9R9 158 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 C6orf50Q9HD87 102 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 DDX4Q9NQI0 724 aaKnown RBP8.51□□□□□ -1.05
CXCR4-202ENST00000409817 RGS17Q9UGC6 210 aaPredicted RBP8.51□□□□□ -1.05
CXCR4-202ENST00000409817 EP400Q96L91 3159 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 GREB1LQ9C091 1923 aaPredicted RBP8.51□□□□□ -1.05
CXCR4-202ENST00000409817 OFD1O75665 1012 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 SLFN14P0C7P3 912 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 PDHBP11177 359 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 ATP2B1P20020 1258 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 TXLNAP40222 546 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 PRPHP41219 470 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 SARSP49591 514 aaKnown RBP8.51□□□□□ -1.05
CXCR4-202ENST00000409817 SCNN1DP51172 638 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 SOGA3Q5TF21 947 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 WWC2Q6AWC2 1192 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 PPP1R18Q6NYC8 613 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 POTEAQ6S8J7 498 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 HEATR3Q7Z4Q2 680 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 FOXP4Q8IVH2 680 aaPredicted RBP8.51□□□□□ -1.05
CXCR4-202ENST00000409817 DRC7Q8IY82 874 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 MLKLQ8NB16 471 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 SPATA20Q8TB22 786 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 PIBF1Q8WXW3 757 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 SMARCE1Q969G3 411 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 PI4KBQ9UBF8 816 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 PCDHA5Q9Y5H7 936 aa8.51□□□□□ -1.05
CXCR4-202ENST00000409817 ZNF646O15015 1829 aaPredicted RBP8.5□□□□□ -1.05
CXCR4-202ENST00000409817 ENTPD3O75355 529 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 SHMT1P34896 483 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 TERF1P54274 439 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 MYL5Q02045 173 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 PNOCQ13519 176 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 ZNF174Q15697 407 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 CCDC93Q567U6 631 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 PDXDC2PQ6P474 469 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 IQUBQ8NA54 791 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 PSMD1Q99460 953 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 IMPACTQ9P2X3 320 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 CLIP2Q9UDT6 1046 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 SYNPO2Q9UMS6 1093 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 PCDHA6Q9UN73 950 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 GPSM3Q9Y4H4 160 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 PCDHA8Q9Y5H6 950 aa8.5□□□□□ -1.05
CXCR4-202ENST00000409817 BAZ2BQ9UIF8 2168 aaKnown RBP8.5□□□□□ -1.05
CXCR4-202ENST00000409817 PSME4Q14997 1843 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 ATRNL1Q5VV63 1379 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 AKR1B1P15121 316 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 CHRNA5P30532 468 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 NAPAP54920 295 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 GSDMDP57764 484 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 GRIN1Q05586 938 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 SLC35G1Q2M3R5 365 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 PTCRAQ6ISU1 281 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-202ENST00000409817 SH3RF1Q7Z6J0 888 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 KIAA0825Q8IV33 1275 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 TTLL6Q8N841 843 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 ERCC4Q92889 916 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-202ENST00000409817 GPKOWQ92917 476 aaPredicted RBP eCLIP8.49□□□□□ -1.05
CXCR4-202ENST00000409817 MKL1Q969V6 931 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 GSDMAQ96QA5 445 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 GLT8D2Q9H1C3 349 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 SERTAD1Q9UHV2 236 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 VWA3AA6NCI4 1184 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 BIN1O00499 593 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 PPIP5K2O43314 1243 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 CBFA2T2O43439 604 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 ADH1BP00325 375 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 MYL1P05976 194 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 VEGFAP15692 232 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-202ENST00000409817 ERCC5P28715 1186 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-202ENST00000409817 MCM7P33993 719 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 PDE4CQ08493 712 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 ZNF543Q08ER8 600 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 MORC3Q14149 939 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 NCAPHQ15003 741 aa8.49□□□□□ -1.05
CXCR4-202ENST00000409817 NONOQ15233 471 aaKnown RBP eCLIP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms