RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.13□□□□□ -0.79
VWA3B-201ENST00000409460 U3KPZ7 1027 aaPredicted RBP10.13□□□□□ -0.79
VWA3B-201ENST00000409460 ICAM1P05362 532 aa10.13□□□□□ -0.79
VWA3B-201ENST00000409460 ASGR1P07306 291 aa10.13□□□□□ -0.79
VWA3B-201ENST00000409460 ARHGEF16Q5VV41 709 aa10.13□□□□□ -0.79
VWA3B-201ENST00000409460 KCTD1Q719H9 257 aa10.13□□□□□ -0.79
VWA3B-201ENST00000409460 FLRT1Q9NZU1 646 aa10.13□□□□□ -0.79
VWA3B-201ENST00000409460 SEC63Q9UGP8 760 aaKnown RBP10.13□□□□□ -0.79
VWA3B-201ENST00000409460 IL23AQ9NPF7 189 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 ZNF214Q9UL59 606 aaPredicted RBP10.12□□□□□ -0.79
VWA3B-201ENST00000409460 TERF1P54274 439 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 EEPD1Q7L9B9 569 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 ROBO3Q96MS0 1386 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 GH1P01241 217 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 KIF5BP33176 963 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 PTPN11Q06124 597 aaPredicted RBP10.12□□□□□ -0.79
VWA3B-201ENST00000409460 AKNAD1Q5T1N1 836 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 NSUN6Q8TEA1 469 aaKnown RBP10.12□□□□□ -0.79
VWA3B-201ENST00000409460 PRR12Q9ULL5 1215 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 FAM50BQ9Y247 325 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 M0R2C6 588 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 GNAT1P11488 350 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 GNAQP50148 359 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 SHHQ15465 462 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 STXBP2Q15833 593 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 NFXL1Q6ZNB6 911 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 CCDC144CPQ8IYA2 1237 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 PPM1EQ8WY54 764 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 SYNRGQ9UMZ2 1314 aa10.12□□□□□ -0.79
VWA3B-201ENST00000409460 MYH1P12882 1939 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 DYNC1I1O14576 645 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 MCM4P33991 863 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 ITGA7Q13683 1181 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 C8orf34Q49A92 452 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 FBXO11Q86XK2 927 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 DNERQ8NFT8 737 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 NOP56O00567 594 aaKnown RBP10.11□□□□□ -0.79
VWA3B-201ENST00000409460 IFIT1BQ5T764 474 aaKnown RBP10.11□□□□□ -0.79
VWA3B-201ENST00000409460 TAF3Q5VWG9 929 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 LNPKQ9C0E8 428 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 ADAMTS5Q9UNA0 930 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 LOC285556D6RIA3 1793 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 SNX17Q15036 470 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 ZNF771Q7L3S4 317 aaPredicted RBP10.11□□□□□ -0.79
VWA3B-201ENST00000409460 RSPH3Q86UC2 560 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 MICALL1Q8N3F8 863 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 SAMD3Q8N6K7 520 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 PPP2R3CQ969Q6 453 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 WDR11Q9BZH6 1224 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 MRVI1Q9Y6F6 885 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 WDR19Q8NEZ3 1342 aa10.11□□□□□ -0.79
VWA3B-201ENST00000409460 CATIPQ7Z7H3 387 aa10.1□□□□□ -0.79
VWA3B-201ENST00000409460 C7orf31Q8N865 590 aa10.1□□□□□ -0.79
VWA3B-201ENST00000409460 CTCFLQ8NI51 663 aaPredicted RBP10.1□□□□□ -0.79
VWA3B-201ENST00000409460 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
VWA3B-201ENST00000409460 ZNF865P0CJ78 1059 aaPredicted RBP10.1□□□□□ -0.79
VWA3B-201ENST00000409460 BAATQ14032 418 aaPredicted RBP10.1□□□□□ -0.79
VWA3B-201ENST00000409460 ANKRD33Q7Z3H0 272 aa10.1□□□□□ -0.79
VWA3B-201ENST00000409460 TSC1Q92574 1164 aa10.1□□□□□ -0.79
VWA3B-201ENST00000409460 TXNP10599 105 aaKnown RBP10.1□□□□□ -0.79
VWA3B-201ENST00000409460 PDE1AP54750 535 aa10.1□□□□□ -0.79
VWA3B-201ENST00000409460 Q7L0L9 218 aa10.1□□□□□ -0.79
VWA3B-201ENST00000409460 DGKHQ86XP1 1220 aa10.1□□□□□ -0.79
VWA3B-201ENST00000409460 TRPV1Q8NER1 839 aa10.1□□□□□ -0.79
VWA3B-201ENST00000409460 THEGQ9P2T0 379 aa10.1□□□□□ -0.79
VWA3B-201ENST00000409460 PPP2R2DQ66LE6 453 aa10.1□□□□□ -0.79
VWA3B-201ENST00000409460 A1CFQ9NQ94 594 aaKnown RBP10.1□□□□□ -0.79
VWA3B-201ENST00000409460 HAND2P61296 217 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 BECN1Q14457 450 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 RNF20Q5VTR2 975 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 TSHZ3Q63HK5 1081 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 AMNQ9BXJ7 453 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 SEMA6BQ9H3T3 888 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 MLXIPQ9HAP2 919 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 CEP350Q5VT06 3117 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 HDAC1Q13547 482 aaPredicted RBP10.09□□□□□ -0.79
VWA3B-201ENST00000409460 CXCL17Q6UXB2 119 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 IWS1Q96ST2 819 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 VAT1LQ9HCJ6 419 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 TCP11L1Q9NUJ3 509 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 USH1GQ495M9 461 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 VPS53Q5VIR6 699 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 NLRX1Q86UT6 975 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 SLC9A7Q96T83 725 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 CDX2Q99626 313 aaPredicted RBP10.09□□□□□ -0.79
VWA3B-201ENST00000409460 UPF3AQ9H1J1 476 aaKnown RBP10.09□□□□□ -0.79
VWA3B-201ENST00000409460 ANAPC4Q9UJX5 808 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 CEP290O15078 2479 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 PLIN4Q96Q06 1357 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 MGAMO43451 1857 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 FRMPD2Q68DX3 1309 aaPredicted RBP10.09□□□□□ -0.79
VWA3B-201ENST00000409460 LAMB1P07942 1786 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 FAM193AP78312 1265 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 DUSP28Q4G0W2 176 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 TMEM67Q5HYA8 995 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 GAS2L3Q86XJ1 694 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 CAGE1Q8TC20 777 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 AGBL1Q96MI9 1066 aa10.09□□□□□ -0.79
VWA3B-201ENST00000409460 ZNF576Q9H609 170 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms