RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 PNMA1Q8ND90 353 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 DCAF4Q8WV16 495 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 PHKBQ93100 1093 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 LRRC2Q9BYS8 371 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 MROH7-TTC4A0A0A0MT08 1334 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 CXCL11O14625 94 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 RNF8O76064 485 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 MTIF2P46199 727 aaKnown RBP8.07□□□□□ -1.12
SCN9A-202ENST00000409435 VEPH1Q14D04 833 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 DSTYKQ6XUX3 929 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 RDH13Q8NBN7 331 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 LPAR1Q92633 364 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 IGFLR1Q9H665 355 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 FSD2A1L4K1 749 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 KLRF2D3W0D1 207 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 OPA1O60313 960 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 GRK4P32298 578 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 ACTN2P35609 894 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 SDE2Q6IQ49 451 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 RAB3IL1Q8TBN0 382 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 CD99L2Q8TCZ2 262 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 ZKSCAN4Q969J2 545 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-202ENST00000409435 PGBD4Q96DM1 585 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 OGFRQ9NZT2 677 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 PCDHB12Q9Y5F1 795 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 RBM8AQ9Y5S9 174 aaKnown RBP8.07□□□□□ -1.12
SCN9A-202ENST00000409435 SMCO2A6NFE2 343 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 YWHAEP62258 255 aaKnown RBP8.07□□□□□ -1.12
SCN9A-202ENST00000409435 ARHGAP4P98171 946 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 SF3B3Q15393 1217 aaKnown RBP8.07□□□□□ -1.12
SCN9A-202ENST00000409435 SPA17Q15506 151 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 TSNAXIP1Q2TAA8 658 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 RRAGBQ5VZM2 374 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 IFNL3Q8IZI9 196 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 KBTBD3Q8NAB2 608 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 CCDC110Q8TBZ0 833 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 ZSCAN10Q96SZ4 725 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-202ENST00000409435 MMS19Q96T76 1030 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 RMND1Q9NWS8 449 aa8.07□□□□□ -1.12
SCN9A-202ENST00000409435 V9GY48 417 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-202ENST00000409435 MACROD2A1Z1Q3 448 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 HOOK3Q86VS8 718 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 SLAIN1Q8ND83 568 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 SH3RF3Q8TEJ3 882 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-202ENST00000409435 ATRIPQ8WXE1 791 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 TTC14Q96N46 770 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 ZNF577Q9BSK1 485 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 ARFGAP3Q9NP61 516 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 FNDC3AQ9Y2H6 1198 aaKnown RBP8.06□□□□□ -1.12
SCN9A-202ENST00000409435 GABPAQ06546 454 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 HHIPL2Q6UWX4 724 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 TEX13BQ9BXU2 312 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 NUP62CLQ9H1M0 184 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 FAM196BA6NMK8 535 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 MAP3K13O43283 966 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 DAPK3O43293 454 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 RXRAP19793 462 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 TPD52P55327 224 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-202ENST00000409435 SEPT2Q15019 361 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 SLFN12Q8IYM2 578 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 TCP11Q8WWU5 503 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 RNPC3Q96LT9 517 aaKnown RBP8.06□□□□□ -1.12
SCN9A-202ENST00000409435 SRRTQ9BXP5 876 aaKnown RBP8.06□□□□□ -1.12
SCN9A-202ENST00000409435 CDC42BPBQ9Y5S2 1711 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 TRAF5O00463 557 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 KPNA6O60684 536 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 USO1O60763 962 aaKnown RBP8.06□□□□□ -1.12
SCN9A-202ENST00000409435 CTSHP09668 335 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 GOLGA8HP0CJ92 632 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 SDSP20132 328 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 RPL13P26373 211 aaKnown RBP8.06□□□□□ -1.12
SCN9A-202ENST00000409435 CDK8P49336 464 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 ATP11AP98196 1134 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 CNNM3Q8NE01 707 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 IWS1Q96ST2 819 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 RMDN3Q96TC7 470 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 SYNDIG1Q9H7V2 258 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 CREBZFQ9NS37 354 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 MROH7Q68CQ1 1323 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 WDR46O15213 610 aaKnown RBP8.06□□□□□ -1.12
SCN9A-202ENST00000409435 BUB1BO60566 1050 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-202ENST00000409435 PFDN1O60925 122 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 TXKP42681 527 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 Q6ZUG5 572 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 DDX12PQ92771 950 aa8.06□□□□□ -1.12
SCN9A-202ENST00000409435 INO80Q9ULG1 1556 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-202ENST00000409435 PPFIA2O75334 1257 aa8.05□□□□□ -1.12
SCN9A-202ENST00000409435 GMNNO75496 209 aa8.05□□□□□ -1.12
SCN9A-202ENST00000409435 CCDC157Q569K6 752 aa8.05□□□□□ -1.12
SCN9A-202ENST00000409435 RNF219Q5W0B1 726 aaPredicted RBP8.05□□□□□ -1.12
SCN9A-202ENST00000409435 KANK3Q6NY19 840 aa8.05□□□□□ -1.12
SCN9A-202ENST00000409435 SPATA31E1Q6ZUB1 1445 aa8.05□□□□□ -1.12
SCN9A-202ENST00000409435 CTAGE6Q86UF2 777 aa8.05□□□□□ -1.12
SCN9A-202ENST00000409435 MROH8Q9H579 483 aa8.05□□□□□ -1.12
SCN9A-202ENST00000409435 MTUS1Q9ULD2 1270 aa8.05□□□□□ -1.12
SCN9A-202ENST00000409435 PFASO15067 1338 aa8.05□□□□□ -1.12
SCN9A-202ENST00000409435 SLC16A2P36021 539 aa8.05□□□□□ -1.12
SCN9A-202ENST00000409435 DMP1Q13316 513 aaPredicted RBP8.05□□□□□ -1.12
SCN9A-202ENST00000409435 CALCRLQ16602 461 aa8.05□□□□□ -1.12
SCN9A-202ENST00000409435 CES5AQ6NT32 575 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms