RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 PAK2Q13177 524 aa27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 AK8Q96MA6 479 aa27.5■■□□□ 1.99
SPIRE1-202ENST00000409402 HAUS1Q96CS2 278 aa27.49■■□□□ 1.99
SPIRE1-202ENST00000409402 PARP2Q9UGN5 583 aa27.49■■□□□ 1.99
SPIRE1-202ENST00000409402 ZHX1Q9UKY1 873 aaPredicted RBP27.49■■□□□ 1.99
SPIRE1-202ENST00000409402 ADGRL3Q9HAR2 1447 aa27.49■■□□□ 1.99
SPIRE1-202ENST00000409402 SOS2Q07890 1332 aaPredicted RBP27.49■■□□□ 1.99
SPIRE1-202ENST00000409402 PCDHA7Q9UN72 937 aa27.49■■□□□ 1.99
SPIRE1-202ENST00000409402 BSPRYQ5W0U4 402 aa27.49■■□□□ 1.99
SPIRE1-202ENST00000409402 PREX2Q70Z35 1606 aa27.49■■□□□ 1.99
SPIRE1-202ENST00000409402 DIXDC1Q155Q3 683 aa27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 LARP4BQ92615 738 aaKnown RBP27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 GJA10Q969M2 543 aa27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 MKRN1Q9UHC7 482 aaKnown RBP27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 PNMA3Q9UL41 463 aa27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 AFG3L2Q9Y4W6 797 aa27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 USP17L8P0C7I0 530 aa27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 PTPN12Q05209 780 aaKnown RBP27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 PPP2R5CQ13362 524 aa27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 ANKRD36BP1Q96IX9 119 aa27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 RAB17Q9H0T7 212 aa27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 CLIC4Q9Y696 253 aa27.48■■□□□ 1.99
SPIRE1-202ENST00000409402 INO80B-WBP1J3KQ70 363 aa27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 RUFY4Q6ZNE9 571 aa27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 CARD6Q9BX69 1037 aa27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 INO80BQ9C086 356 aaPredicted RBP27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 ZNF215Q9UL58 517 aaPredicted RBP27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 CYP21A2P08686 494 aa27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 NACC1Q96RE7 527 aa27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 CIB2O75838 187 aa27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 POLR2FP61218 127 aaKnown RBP27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 HHATQ5VTY9 493 aa27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 TTLL11Q8NHH1 800 aa27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 ADKP55263 362 aaKnown RBP27.47■■□□□ 1.99
SPIRE1-202ENST00000409402 MTMR3Q13615 1198 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 TIGD1Q96MW7 591 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 KMT5AQ9NQR1 393 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 ZSCAN20P17040 1043 aaPredicted RBP27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 MNAT1P51948 309 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 OSBPL3Q9H4L5 887 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 VPS37BQ9H9H4 285 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 NARFQ9UHQ1 456 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 NCAPD2Q15021 1401 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 ABCD1P33897 745 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 MYL7Q01449 175 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 MKRN3Q13064 507 aaKnown RBP27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 PI16Q6UXB8 463 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 METTL23Q86XA0 190 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 TBC1D8O95759 1140 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 TRIM58Q8NG06 486 aa27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 PUS7LQ9H0K6 701 aaKnown RBP27.46■■□□□ 1.99
SPIRE1-202ENST00000409402 BPIFB4P59827 614 aa27.45■■□□□ 1.99
SPIRE1-202ENST00000409402 ZNF589Q86UQ0 364 aaPredicted RBP27.45■■□□□ 1.99
SPIRE1-202ENST00000409402 DYNLL2Q96FJ2 89 aa27.45■■□□□ 1.99
SPIRE1-202ENST00000409402 TBCKQ8TEA7 893 aa27.45■■□□□ 1.99
SPIRE1-202ENST00000409402 GRK7Q8WTQ7 553 aa27.45■■□□□ 1.99
SPIRE1-202ENST00000409402 ACCSQ96QU6 501 aa27.45■■□□□ 1.99
SPIRE1-202ENST00000409402 MYO3BQ8WXR4 1341 aa27.45■■□□□ 1.99
SPIRE1-202ENST00000409402 MFAP3P55082 362 aa27.45■■□□□ 1.98
SPIRE1-202ENST00000409402 CEP170P1Q96L14 293 aa27.45■■□□□ 1.98
SPIRE1-202ENST00000409402 FAM170AA1A519 330 aa27.45■■□□□ 1.98
SPIRE1-202ENST00000409402 ITKQ08881 620 aa27.45■■□□□ 1.98
SPIRE1-202ENST00000409402 Q3C1V9 767 aa27.45■■□□□ 1.98
SPIRE1-202ENST00000409402 RASGRP4Q8TDF6 673 aa27.45■■□□□ 1.98
SPIRE1-202ENST00000409402 DISC1Q9NRI5 854 aa27.45■■□□□ 1.98
SPIRE1-202ENST00000409402 PTPREP23469 700 aa27.45■■□□□ 1.98
SPIRE1-202ENST00000409402 SPATA1Q5VX52 437 aa27.45■■□□□ 1.98
SPIRE1-202ENST00000409402 RIPOR2Q9Y4F9 1068 aa27.45■■□□□ 1.98
SPIRE1-202ENST00000409402 KRT15P19012 456 aa27.44■■□□□ 1.98
SPIRE1-202ENST00000409402 ZNF827Q17R98 1081 aa27.44■■□□□ 1.98
SPIRE1-202ENST00000409402 ABCC3O15438 1527 aa27.44■■□□□ 1.98
SPIRE1-202ENST00000409402 RASGRF1Q13972 1273 aa27.44■■□□□ 1.98
SPIRE1-202ENST00000409402 ADRA2BP18089 450 aa27.44■■□□□ 1.98
SPIRE1-202ENST00000409402 NSFP46459 744 aaKnown RBP27.44■■□□□ 1.98
SPIRE1-202ENST00000409402 PTK2Q05397 1052 aa27.44■■□□□ 1.98
SPIRE1-202ENST00000409402 ATP2A3Q93084 1043 aa27.44■■□□□ 1.98
SPIRE1-202ENST00000409402 RBM6P78332 1123 aaKnown RBP27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 C2orf69Q8N8R5 385 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 NT5C1BQ96P26 610 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 I3L4J1 428 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 PPP6R2O75170 966 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 PLCB1Q9NQ66 1216 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 PRDM15P57071 1507 aaPredicted RBP27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 RNF8O76064 485 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 IFNB1P01574 187 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 EXOC3L4Q17RC7 722 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 AFAP1L1Q8TED9 768 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 GPR101Q96P66 508 aaPredicted RBP27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 ZNF853P0CG23 659 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 CDK8P49336 464 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 NDUFA8P51970 172 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 RNASELQ05823 741 aaKnown RBP27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 COA7Q96BR5 231 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 PGBD1Q96JS3 809 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 RIC8AQ9NPQ8 531 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 CARMIL3Q8ND23 1372 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 H7C1W4 665 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 ADCK5Q3MIX3 580 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 P3H4Q92791 437 aa27.43■■□□□ 1.98
SPIRE1-202ENST00000409402 CDC37Q16543 378 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms