RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TIMP1P01033 207 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 CTDSPL2Q05D32 466 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 IKQ13123 557 aaPredicted RBP10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 TKFCQ3LXA3 575 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 GNASQ5JWF2 1037 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 RASIP1Q5U651 963 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 RCSD1Q6JBY9 416 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 FAM133AQ8N9E0 248 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 CHMP4CQ96CF2 233 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 TRERF1Q96PN7 1200 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 KATNBL1Q9H079 304 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 A1CFQ9NQ94 594 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 INCENPQ9NQS7 918 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 IL17RBQ9NRM6 502 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 RNF146Q9NTX7 359 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 STX8Q9UNK0 236 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 PTPRSQ13332 1948 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 ZNF318Q5VUA4 2279 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 MROH7Q68CQ1 1323 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 A0A0U1RQG5 324 aaPredicted RBP10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 SOWAHBA6NEL2 793 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 ASB14A6NK59 587 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 ARVCFO00192 962 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 CTAGE5O15320 804 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 MYOGP15173 224 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 CSF2RAP15509 400 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 NKX3-2P78367 333 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 TNFAIP2Q03169 654 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 SKIV2LQ15477 1246 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 KRT40Q6A162 431 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 MFSD5Q6N075 450 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 KCTD1Q719H9 257 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 CD320Q9NPF0 282 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 ANAPC4Q9UJX5 808 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 TBX21Q9UL17 535 aa10.85□□□□□ -0.67
NIF3L1-203ENST00000409129 SALL3Q9BXA9 1300 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 RFXAPO00287 272 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 RANBP6O60518 1105 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 NMT2O60551 498 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 GPR37L1O60883 481 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 ALAS1P13196 640 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 NOVP48745 357 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 RABGGTBP53611 331 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 SNAP25P60880 206 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 ALX1Q15699 326 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 ANKRD45Q5TZF3 282 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 VPS53Q5VIR6 699 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 CCDC174Q6PII3 467 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 NOL8Q76FK4 1167 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 EVI5LQ96CN4 794 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 HELLSQ9NRZ9 838 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 PRR12Q9ULL5 1215 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 CACNA1AO00555 2505 aa10.84□□□□□ -0.67
NIF3L1-203ENST00000409129 TLR3O15455 904 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 ORC4O43929 436 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 FGRP09769 529 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 BEX3Q00994 111 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 PPIGQ13427 754 aaKnown RBP eCLIP10.83□□□□□ -0.681e-6■■■■□ 25.5
NIF3L1-203ENST00000409129 MUM1L1Q5H9M0 696 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 IQSEC1Q6DN90 963 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 FAM126BQ8IXS8 530 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 TMEM199Q8N511 208 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 PPP1R12CQ9BZL4 782 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 CYP39A1Q9NYL5 469 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 MTMR7Q9Y216 660 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 GNEQ9Y223 722 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 USP34Q70CQ2 3546 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 ASTN1O14525 1302 aa10.83□□□□□ -0.68
NIF3L1-203ENST00000409129 DYNC1LI2O43237 492 aaPredicted RBP10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 TLL1O43897 1013 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 CABYRO75952 493 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 CD4P01730 458 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 FGAP02671 866 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 SMPD1P17405 629 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 PDE1AP54750 535 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 RRP1P56182 461 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 FSCN1Q16658 493 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 CCDC96Q2M329 555 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 TAPT1Q6NXT6 567 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 CXCL17Q6UXB2 119 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 BTNL9Q6UXG8 535 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 RASGRP2Q7LDG7 609 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 SLC43A3Q8NBI5 491 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 DCAF4Q8WV16 495 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 AP5M1Q9H0R1 490 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 SLC28A3Q9HAS3 691 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 PDGFCQ9NRA1 345 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 MSRAQ9UJ68 235 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 CCPG1Q9ULG6 757 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 Q9Y3F1 56 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 DDX49Q9Y6V7 483 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 CFAP54Q96N23 3096 aa10.82□□□□□ -0.68
NIF3L1-203ENST00000409129 EPOPA6NHQ4 379 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 ZEB2O60315 1214 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 ICAM1P05362 532 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 TOP1P11387 765 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms