RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SATB1Q01826 763 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 PPARAQ07869 468 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 STRN3Q13033 797 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 ZNF579Q8NAF0 562 aaKnown RBP19.32■□□□□ 0.68
SMPD4-202ENST00000409031 GSDMBQ8TAX9 411 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 MAP3K7O43318 606 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 REXO1Q8N1G1 1221 aaKnown RBP19.32■□□□□ 0.68
SMPD4-202ENST00000409031 AATFQ9NY61 560 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMPD4-202ENST00000409031 TNKSO95271 1327 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 TTLL7Q6ZT98 887 aa19.31■□□□□ 0.68
SMPD4-202ENST00000409031 SPATA5Q8NB90 893 aa19.31■□□□□ 0.68
SMPD4-202ENST00000409031 RIC8AQ9NPQ8 531 aa19.31■□□□□ 0.68
SMPD4-202ENST00000409031 SART1O43290 800 aaKnown RBP19.31■□□□□ 0.68
SMPD4-202ENST00000409031 ITIH3Q06033 890 aa19.31■□□□□ 0.68
SMPD4-202ENST00000409031 UBE3CQ15386 1083 aa19.31■□□□□ 0.68
SMPD4-202ENST00000409031 NUGGCQ68CJ6 796 aa19.31■□□□□ 0.68
SMPD4-202ENST00000409031 ZMYND12Q9H0C1 365 aa19.31■□□□□ 0.68
SMPD4-202ENST00000409031 PDE6AP16499 860 aa19.31■□□□□ 0.68
SMPD4-202ENST00000409031 MAK16Q9BXY0 300 aaKnown RBP19.31■□□□□ 0.68
SMPD4-202ENST00000409031 GCFC2P16383 781 aaKnown RBP19.3■□□□□ 0.68
SMPD4-202ENST00000409031 WDR44Q5JSH3 913 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 MIER3Q7Z3K6 550 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 POGZQ7Z3K3 1410 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 LAD1O00515 517 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 ATF2P15336 505 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 MAN1A1P33908 653 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 FAM26FQ5R3K3 315 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.3■□□□□ 0.68
SMPD4-202ENST00000409031 ARHGEF5Q12774 1597 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 KDM3AQ9Y4C1 1321 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 LGALS16A8MUM7 142 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 DNAJC8O75937 253 aaPredicted RBP19.3■□□□□ 0.68
SMPD4-202ENST00000409031 GNPTABQ3T906 1256 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 ZSCAN10Q96SZ4 725 aaPredicted RBP19.3■□□□□ 0.68
SMPD4-202ENST00000409031 IRX2Q9BZI1 471 aaPredicted RBP19.3■□□□□ 0.68
SMPD4-202ENST00000409031 STOML1Q9UBI4 398 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 EXOC3O60645 756 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 DIXDC1Q155Q3 683 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 ARHGAP44Q17R89 818 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 OSBPL9Q96SU4 736 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 CENPKQ9BS16 269 aa19.3■□□□□ 0.68
SMPD4-202ENST00000409031 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
SMPD4-202ENST00000409031 DISP1Q96F81 1524 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 PLS1Q14651 629 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 ABCC12Q96J65 1359 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 SERPING1P05155 500 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 ADCY7P51828 1080 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 ZBTB17Q13105 803 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 DPF2Q92785 391 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 PCDHB13Q9Y5F0 798 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 AK8Q96MA6 479 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 CCT8L2Q96SF2 557 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 LMNB1P20700 586 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 HOXA7P31268 230 aaPredicted RBP19.29■□□□□ 0.68
SMPD4-202ENST00000409031 FKBP3Q00688 224 aaKnown RBP19.29■□□□□ 0.68
SMPD4-202ENST00000409031 NR5A1Q13285 461 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 EXOC3L4Q17RC7 722 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 TSGA10IPQ3SY00 556 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 BEND6Q5SZJ8 279 aaPredicted RBP19.29■□□□□ 0.68
SMPD4-202ENST00000409031 CHMP6Q96FZ7 201 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 FUCA2Q9BTY2 467 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 ANGPTL2Q9UKU9 493 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 HPCAL4Q9UM19 191 aa19.29■□□□□ 0.68
SMPD4-202ENST00000409031 RASSF10A6NK89 507 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 MAPK13O15264 365 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 MRPS25P82663 173 aaKnown RBP19.28■□□□□ 0.68
SMPD4-202ENST00000409031 ADAM9Q13443 819 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 PCDHB6Q9Y5E3 794 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 ADAMTS12P58397 1594 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 MDH1P40925 334 aaKnown RBP19.28■□□□□ 0.68
SMPD4-202ENST00000409031 CCNI2Q6ZMN8 369 aaPredicted RBP19.28■□□□□ 0.68
SMPD4-202ENST00000409031 MRPL44Q9H9J2 332 aaKnown RBP19.28■□□□□ 0.68
SMPD4-202ENST00000409031 MED14O60244 1454 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 TEX33O43247 280 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 GCNT3O95395 438 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 VPS41P49754 854 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 MAGOHP61326 146 aaKnown RBP19.28■□□□□ 0.68
SMPD4-202ENST00000409031 MTF1Q14872 753 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 ZNF473Q8WTR7 871 aaKnown RBP19.28■□□□□ 0.68
SMPD4-202ENST00000409031 DDAH1O94760 285 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 GCP02774 474 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 TECP42680 631 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 RASGRP2Q7LDG7 609 aa19.28■□□□□ 0.68
SMPD4-202ENST00000409031 SH2B2O14492 632 aaPredicted RBP19.27■□□□□ 0.68
SMPD4-202ENST00000409031 SASH1O94885 1247 aa19.27■□□□□ 0.68
SMPD4-202ENST00000409031 GUCY1A3Q02108 690 aa19.27■□□□□ 0.68
SMPD4-202ENST00000409031 ST13P4Q8IZP2 240 aaPredicted RBP19.27■□□□□ 0.68
SMPD4-202ENST00000409031 HDAC6Q9UBN7 1215 aa19.27■□□□□ 0.68
SMPD4-202ENST00000409031 PLEKHG3A1L390 1219 aa19.27■□□□□ 0.68
SMPD4-202ENST00000409031 PALM2Q8IXS6 379 aa19.27■□□□□ 0.68
SMPD4-202ENST00000409031 THOC1Q96FV9 657 aaKnown RBP19.27■□□□□ 0.68
SMPD4-202ENST00000409031 TSPYL2Q9H2G4 693 aaPredicted RBP19.27■□□□□ 0.68
SMPD4-202ENST00000409031 LIFRP42702 1097 aa19.27■□□□□ 0.67
SMPD4-202ENST00000409031 SLCO1A2P46721 670 aa19.27■□□□□ 0.67
SMPD4-202ENST00000409031 PSMD6Q15008 389 aa19.27■□□□□ 0.67
SMPD4-202ENST00000409031 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.67
SMPD4-202ENST00000409031 SPATA4Q8NEY3 305 aa19.27■□□□□ 0.67
SMPD4-202ENST00000409031 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.27■□□□□ 0.67
SMPD4-202ENST00000409031 ATP2A3Q93084 1043 aa19.27■□□□□ 0.67
SMPD4-202ENST00000409031 FAM212AQ96EL1 285 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms