RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 TRIML1Q8N9V2 468 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 FAM200AQ8TCP9 573 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 MTMR9Q96QG7 549 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 SLC38A10Q9HBR0 1119 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 TUBE1Q9UJT0 475 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 ADAMTS5Q9UNA0 930 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 ZHX2Q9Y6X8 837 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 DCAF8L1A6NGE4 600 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 USP17L15C9J2P7 530 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 USP17L13C9JLJ4 530 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 USP17L11C9JVI0 530 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 USP17L18D6R9N7 530 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 USP17L22D6RA61 530 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 USP17L17D6RBQ6 530 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 USP17L19D6RCP7 530 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 USP17L20D6RJB6 530 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 POLR2DO15514 142 aaKnown RBP11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 SMC2O95347 1197 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 VCAM1P19320 739 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 UBA7P41226 1012 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 USP17L24Q0WX57 530 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 MTMR2Q13614 643 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 CALCRLQ16602 461 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 LONRF3Q496Y0 759 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 TPRNQ4KMQ1 711 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 NOM1Q5C9Z4 860 aaKnown RBP11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 NT5DC1Q5TFE4 455 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 LDHDQ86WU2 507 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 ERO1BQ86YB8 467 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 CRYGNQ8WXF5 182 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 ZKSCAN4Q969J2 545 aaPredicted RBP11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 FAM20AQ96MK3 541 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 ANO3Q9BYT9 981 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 GLIS2Q9BZE0 524 aaPredicted RBP11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 RBSNQ9H1K0 784 aa11.68□□□□□ -0.54
SNORD88C-201ENST00000408061 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 MYH7BA7E2Y1 1941 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 ADAMTS3O15072 1205 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 FLOT1O75955 427 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 DSG3P32926 999 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 FKBP1BP68106 108 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 ZYXQ15942 572 aaKnown RBP11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 Q4G0T1 1027 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 CATSPERGQ6ZRH7 1159 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 CKAP2LQ8IYA6 745 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 IGSF22Q8N9C0 903 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 PROCA1Q8NCQ7 364 aaPredicted RBP11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 SYMPKQ92797 1274 aaKnown RBP11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 CDCA5Q96FF9 252 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 TANGO6Q9C0B7 1094 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 LRRC27Q9C0I9 530 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 RPAP3Q9H6T3 665 aaPredicted RBP11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 TMEM260Q9NX78 707 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 DDX25Q9UHL0 483 aaKnown RBP11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 DACH1Q9UI36 760 aa11.67□□□□□ -0.54
SNORD88C-201ENST00000408061 WNT7AO00755 349 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 MARCH6O60337 910 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 HSD17B4P51659 736 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 NLRP12P59046 1061 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 ARHGAP4P98171 946 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 MDM2Q00987 491 aaPredicted RBP11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 AMPD3Q01432 767 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 PABPC4Q13310 644 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 POSTNQ15063 836 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 UBE2SQ16763 222 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 USH1GQ495M9 461 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 XRRA1Q6P2D8 792 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 USP17L6PQ6QN14 398 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 SH3RF1Q7Z6J0 888 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 MB21D1Q8N884 522 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 SPATA20Q8TB22 786 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 CALML4Q96GE6 196 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 GSDMAQ96QA5 445 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 TMEM60Q9H2L4 133 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 CCPG1Q9ULG6 757 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 SCAF8Q9UPN6 1271 aaKnown RBP11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 MRVI1Q9Y6F6 885 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 SNCAIPQ9Y6H5 919 aa11.66□□□□□ -0.54
SNORD88C-201ENST00000408061 PARP14Q460N5 1801 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 ZNF536O15090 1300 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 PAPPA2Q9BXP8 1791 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 SPDYE5A6NIY4 337 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 SMTNL1A8MU46 457 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 VWA5AO00534 786 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 OPLAHO14841 1288 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 ACTN4O43707 911 aaKnown RBP11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 ZNF165P49910 485 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 GRIN1Q05586 938 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 CCDC173Q0VFZ6 552 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 PPIL2Q13356 520 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 VGLL4Q14135 290 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 IL17AQ16552 155 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 PRAMEF18Q5VWM3 479 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 RRAGBQ5VZM2 374 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 CCDC174Q6PII3 467 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 FASTKD5Q7L8L6 764 aaKnown RBP11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 NIPA1Q7RTP0 329 aa11.65□□□□□ -0.54
SNORD88C-201ENST00000408061 EPSTI1Q96J88 318 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms