RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 HDAC6Q9UBN7 1215 aa18.54■□□□□ 0.56
COL23A1-202ENST00000407622 CCNE1P24864 410 aa18.53■□□□□ 0.56
COL23A1-202ENST00000407622 MFSD14BQ5SR56 506 aa18.53■□□□□ 0.56
COL23A1-202ENST00000407622 KIAA0895Q8NCT3 520 aa18.53■□□□□ 0.56
COL23A1-202ENST00000407622 MSANTD4Q8NCY6 345 aa18.53■□□□□ 0.56
COL23A1-202ENST00000407622 RPGRQ92834 1020 aaKnown RBP18.53■□□□□ 0.56
COL23A1-202ENST00000407622 H3BQF6 201 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 EDIL3O43854 480 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 DNM2P50570 870 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 BRD3Q15059 726 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 MIIPQ5JXC2 388 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 BEND6Q5SZJ8 279 aaPredicted RBP18.52■□□□□ 0.56
COL23A1-202ENST00000407622 C7orf25Q9BPX7 421 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 CUEDC2Q9H467 287 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 MYO1AQ9UBC5 1043 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
COL23A1-202ENST00000407622 RAB21Q9UL25 225 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 RCCD1A6NED2 376 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 GNA11P29992 359 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 TXKP42681 527 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 ST5P78524 1137 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 COL23A1Q86Y22 540 aaPredicted RBP18.52■□□□□ 0.56
COL23A1-202ENST00000407622 COA7Q96BR5 231 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 ZNF287Q9HBT7 754 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 MYO6Q9UM54 1294 aa18.52■□□□□ 0.56
COL23A1-202ENST00000407622 TNS1Q9HBL0 1735 aaKnown RBP18.52■□□□□ 0.55
COL23A1-202ENST00000407622 SERPINB2P05120 415 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 IL1R1P14778 569 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 CYP2C19P33261 490 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 GYS2P54840 703 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 EIF6P56537 245 aaKnown RBP18.51■□□□□ 0.55
COL23A1-202ENST00000407622 VSNL1P62760 191 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 MEA1Q16626 185 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 SOGA3Q5TF21 947 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 REXO1Q8N1G1 1221 aaKnown RBP18.51■□□□□ 0.55
COL23A1-202ENST00000407622 SLC39A2Q9NP94 309 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 POLLQ9UGP5 575 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 CTAGE15A4D2H0 777 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 MAP2K7O14733 419 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 SLC37A4O43826 429 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 CTAGE8P0CG41 777 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 TRIM21P19474 475 aaKnown RBP18.51■□□□□ 0.55
COL23A1-202ENST00000407622 TBC1D8BQ0IIM8 1120 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 GRB10Q13322 594 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 TUBB2AQ13885 445 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 WHAMMP3Q1A5X7 153 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 CTAGE6Q86UF2 777 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 CTAGE4Q8IX94 777 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 LRRC47Q8N1G4 583 aaKnown RBP18.51■□□□□ 0.55
COL23A1-202ENST00000407622 TUBB2BQ9BVA1 445 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 SEMA6BQ9H3T3 888 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 MAGEF1Q9HAY2 307 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 ABCB6Q9NP58 842 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 BLOC1S4Q9NUP1 217 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.51■□□□□ 0.55
COL23A1-202ENST00000407622 GGA1Q9UJY5 639 aa18.51■□□□□ 0.55
COL23A1-202ENST00000407622 TDP2O95551 362 aa18.5■□□□□ 0.55
COL23A1-202ENST00000407622 ATP1A1P05023 1023 aaKnown RBP18.5■□□□□ 0.55
COL23A1-202ENST00000407622 PDHBP11177 359 aa18.5■□□□□ 0.55
COL23A1-202ENST00000407622 DDR1Q08345 913 aa18.5■□□□□ 0.55
COL23A1-202ENST00000407622 LACRTQ9GZZ8 138 aa18.5■□□□□ 0.55
COL23A1-202ENST00000407622 SRGAP2O75044 1071 aa18.5■□□□□ 0.55
COL23A1-202ENST00000407622 MTIF2P46199 727 aaKnown RBP18.5■□□□□ 0.55
COL23A1-202ENST00000407622 MCM6Q14566 821 aa18.5■□□□□ 0.55
COL23A1-202ENST00000407622 CCDC122Q5T0U0 273 aa18.5■□□□□ 0.55
COL23A1-202ENST00000407622 TRAPPC11Q7Z392 1133 aa18.5■□□□□ 0.55
COL23A1-202ENST00000407622 NOC3LQ8WTT2 800 aaKnown RBP18.5■□□□□ 0.55
COL23A1-202ENST00000407622 PNMA5Q96PV4 448 aa18.5■□□□□ 0.55
COL23A1-202ENST00000407622 RIOX1Q9H6W3 641 aa18.5■□□□□ 0.55
COL23A1-202ENST00000407622 MYMKA6NI61 221 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 NOVP48745 357 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 PICALMQ13492 652 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 CRY2Q49AN0 593 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 HNRNPLLQ8WVV9 542 aaKnown RBP18.49■□□□□ 0.55
COL23A1-202ENST00000407622 MTMR9Q96QG7 549 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 NUDT12Q9BQG2 462 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 NOC4LQ9BVI4 516 aaKnown RBP18.49■□□□□ 0.55
COL23A1-202ENST00000407622 HAUS4Q9H6D7 363 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 DUSP10Q9Y6W6 482 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 BICDL2A1A5D9 508 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 POTEMA6NI47 508 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 POLRMTO00411 1230 aaKnown RBP18.49■□□□□ 0.55
COL23A1-202ENST00000407622 PSMD14O00487 310 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 ATP2B4P23634 1241 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 NHEJ1Q9H9Q4 299 aaPredicted RBP18.49■□□□□ 0.55
COL23A1-202ENST00000407622 GAKO14976 1311 aa18.49■□□□□ 0.55
COL23A1-202ENST00000407622 AKR1B1P15121 316 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 CYP27A1Q02318 531 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 DYMQ7RTS9 669 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 GPIHBP1Q8IV16 184 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 FLAD1Q8NFF5 587 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 PCMTD1Q96MG8 357 aaPredicted RBP18.48■□□□□ 0.55
COL23A1-202ENST00000407622 RNF216Q9NWF9 866 aaPredicted RBP18.48■□□□□ 0.55
COL23A1-202ENST00000407622 DAGLAQ9Y4D2 1042 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 EPHB6O15197 1021 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 PLEKP08567 350 aaPredicted RBP18.48■□□□□ 0.55
COL23A1-202ENST00000407622 EN1Q05925 392 aaPredicted RBP18.48■□□□□ 0.55
COL23A1-202ENST00000407622 SEMA3FQ13275 785 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 CALCRLQ16602 461 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 TSR1Q2NL82 804 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms