RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 SPNS2Q8IVW8 549 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 SMC5Q8IY18 1101 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 MICALL1Q8N3F8 863 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 FAM133AQ8N9E0 248 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 PRPF38AQ8NAV1 312 aaKnown RBP7.39□□□□□ -1.23
RPA3-204ENST00000406109 DDX11Q96FC9 970 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 SCLYQ96I15 445 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 RAVER2Q9HCJ3 691 aaKnown RBP7.39□□□□□ -1.23
RPA3-204ENST00000406109 CD320Q9NPF0 282 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 SLC4A7Q9Y6M7 1214 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 SCN10AQ9Y5Y9 1956 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 MYH7P12883 1935 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 PTPRSQ13332 1948 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 LRRC37A2A6NM11 1700 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 PTPRZ1P23471 2315 aaPredicted RBP7.38□□□□□ -1.23
RPA3-204ENST00000406109 TTC41PQ6P2S7 1318 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 SOWAHBA6NEL2 793 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 TLR3O15455 904 aaKnown RBP7.38□□□□□ -1.23
RPA3-204ENST00000406109 LPXNO60711 386 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 GPR37L1O60883 481 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 NEFLP07196 543 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 CA3P07451 260 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 ATP2A2P16615 1042 aaKnown RBP7.38□□□□□ -1.23
RPA3-204ENST00000406109 SMPD1P17405 629 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 MX1P20591 662 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 RASA1P20936 1047 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 PSMC6P62333 389 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 NUCB1Q02818 461 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 TNFAIP2Q03169 654 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 MMRN1Q13201 1228 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 FSCN1Q16658 493 aaKnown RBP7.38□□□□□ -1.23
RPA3-204ENST00000406109 TAPT1Q6NXT6 567 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 SPRED2Q7Z698 418 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 IFNLR1Q8IU57 520 aaPredicted RBP7.38□□□□□ -1.23
RPA3-204ENST00000406109 CPXCR1Q8N123 301 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 ANKRD35Q8N283 1001 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 IL27Q8NEV9 243 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 MKL1Q969V6 931 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.38□□□□□ -1.23
RPA3-204ENST00000406109 PUS7LQ9H0K6 701 aaKnown RBP7.38□□□□□ -1.23
RPA3-204ENST00000406109 CERS4Q9HA82 394 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 SPC25Q9HBM1 224 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 PDGFCQ9NRA1 345 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 NYAP2Q9P242 653 aa7.38□□□□□ -1.23
RPA3-204ENST00000406109 CIZ1Q9ULV3 898 aaPredicted RBP7.38□□□□□ -1.23
RPA3-204ENST00000406109 ZNF536O15090 1300 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 FAM86C2PA6NEL3 165 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 RBAK-RBAKDNI3L0D1 243 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 RAD21O60216 631 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 CABYRO75952 493 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 SLC4A3P48751 1232 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 PDE1AP54750 535 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 EMP3P54852 163 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 TAP1Q03518 808 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 UBE3CQ15386 1083 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 AAK1Q2M2I8 961 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 TMEM31Q5JXX7 168 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 ZSCAN25Q6NSZ9 544 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 TLK2Q86UE8 772 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 CHST13Q8NET6 341 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 SPOCK2Q92563 424 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 KIFC2Q96AC6 838 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 ALDH8A1Q9H2A2 487 aaPredicted RBP7.37□□□□□ -1.23
RPA3-204ENST00000406109 MTIF3Q9H2K0 278 aaKnown RBP7.37□□□□□ -1.23
RPA3-204ENST00000406109 A1CFQ9NQ94 594 aaKnown RBP7.37□□□□□ -1.23
RPA3-204ENST00000406109 TRMT13Q9NUP7 481 aaKnown RBP7.37□□□□□ -1.23
RPA3-204ENST00000406109 COG5Q9UP83 839 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 SLC4A4Q9Y6R1 1079 aa7.37□□□□□ -1.23
RPA3-204ENST00000406109 GSG1L2A8MUP6 293 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 TRIM6-TRIM34B2RNG4 842 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 PI4K2BG5E9Z4 385 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 DYNC1LI2O43237 492 aaPredicted RBP7.36□□□□□ -1.23
RPA3-204ENST00000406109 ZBED4O75132 1171 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 CYP2C9P11712 490 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 OAZ1P54368 228 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 SKIV2LQ15477 1246 aaKnown RBP7.36□□□□□ -1.23
RPA3-204ENST00000406109 SBK1Q52WX2 424 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 TMEM67Q5HYA8 995 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 RPUSD2Q8IZ73 545 aaKnown RBP7.36□□□□□ -1.23
RPA3-204ENST00000406109 KBTBD3Q8NAB2 608 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 PI4K2BQ8TCG2 481 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 PURBQ96QR8 312 aaKnown RBP7.36□□□□□ -1.23
RPA3-204ENST00000406109 STRBPQ96SI9 672 aaKnown RBP7.36□□□□□ -1.23
RPA3-204ENST00000406109 SEZ6LQ9BYH1 1024 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 HOMER2Q9NSB8 354 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 MTMR4Q9NYA4 1195 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 CLIP2Q9UDT6 1046 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 FBXO40Q9UH90 709 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 FEM1BQ9UK73 627 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 HCN4Q9Y3Q4 1203 aa7.36□□□□□ -1.23
RPA3-204ENST00000406109 ZBBXA8MT70 800 aa7.35□□□□□ -1.23
RPA3-204ENST00000406109 RNF113AO15541 343 aaKnown RBP7.35□□□□□ -1.23
RPA3-204ENST00000406109 GRB10Q13322 594 aa7.35□□□□□ -1.23
RPA3-204ENST00000406109 GPNMBQ14956 572 aa7.35□□□□□ -1.23
RPA3-204ENST00000406109 LRRFIP1Q32MZ4 808 aaKnown RBP7.35□□□□□ -1.23
RPA3-204ENST00000406109 NOL8Q76FK4 1167 aaKnown RBP7.35□□□□□ -1.23
RPA3-204ENST00000406109 DEFB128Q7Z7B8 93 aa7.35□□□□□ -1.23
RPA3-204ENST00000406109 PLEKHM2Q8IWE5 1019 aa7.35□□□□□ -1.23
RPA3-204ENST00000406109 FBXO16Q8IX29 292 aaPredicted RBP7.35□□□□□ -1.23
RPA3-204ENST00000406109 STK11IPQ8N1F8 1099 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms