RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 GNEQ9Y223 722 aaKnown RBP15.52■□□□□ 0.08
SDF4-203ENST00000403997 ABCB11O95342 1321 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 LOC102724159A0A0B4J2E5 919 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 SMPD1P17405 629 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 BEX3Q00994 111 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 PDE4DQ08499 809 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 PWP2Q15269 919 aaKnown RBP15.51■□□□□ 0.07
SDF4-203ENST00000403997 TMEM67Q5HYA8 995 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 SH3RF1Q7Z6J0 888 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 TLK2Q86UE8 772 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 RGS22Q8NE09 1264 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 DNERQ8NFT8 737 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 TBC1D5Q92609 795 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 LSG1Q9H089 658 aaKnown RBP15.51■□□□□ 0.07
SDF4-203ENST00000403997 SENP2Q9HC62 589 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 PDLIM7Q9NR12 457 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 MAD2L2Q9UI95 211 aa15.51■□□□□ 0.07
SDF4-203ENST00000403997 MRPL11Q9Y3B7 192 aaKnown RBP15.51■□□□□ 0.07
SDF4-203ENST00000403997 ELP1O95163 1332 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 TRIM43BA6NCK2 446 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 PALM3A6NDB9 673 aaPredicted RBP15.5■□□□□ 0.07
SDF4-203ENST00000403997 DCDC2CA8MYV0 355 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 B4DLN1 442 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 SOX1O00570 391 aaPredicted RBP15.5■□□□□ 0.07
SDF4-203ENST00000403997 CTAGE5O15320 804 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 ZEB2O60315 1214 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 CLTBP09497 229 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 PTGS1P23219 599 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 MRPL12P52815 198 aaKnown RBP15.5■□□□□ 0.07
SDF4-203ENST00000403997 NKX3-2P78367 333 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 BMP2KLQ5H9B9 411 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 MCF2L2Q86YR7 1114 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 BADQ92934 168 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 TRIM43Q96BQ3 446 aaPredicted RBP15.5■□□□□ 0.07
SDF4-203ENST00000403997 WDR11Q9BZH6 1224 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 Q9Y3F1 56 aa15.5■□□□□ 0.07
SDF4-203ENST00000403997 GRM4Q14833 912 aa15.49■□□□□ 0.07
SDF4-203ENST00000403997 FSCN1Q16658 493 aaKnown RBP15.49■□□□□ 0.07
SDF4-203ENST00000403997 TMEM63BQ5T3F8 832 aa15.49■□□□□ 0.07
SDF4-203ENST00000403997 ANKRD33Q7Z3H0 272 aa15.49■□□□□ 0.07
SDF4-203ENST00000403997 CATIPQ7Z7H3 387 aa15.49■□□□□ 0.07
SDF4-203ENST00000403997 MB21D2Q8IYB1 491 aaPredicted RBP15.49■□□□□ 0.07
SDF4-203ENST00000403997 IGDCC4Q8TDY8 1250 aa15.49■□□□□ 0.07
SDF4-203ENST00000403997 LRCH3Q96II8 777 aa15.49■□□□□ 0.07
SDF4-203ENST00000403997 CCDC136Q96JN2 1154 aa15.49■□□□□ 0.07
SDF4-203ENST00000403997 AMNQ9BXJ7 453 aa15.49■□□□□ 0.07
SDF4-203ENST00000403997 MAF1Q9H063 256 aa15.49■□□□□ 0.07
SDF4-203ENST00000403997 ANO2Q9NQ90 1003 aa15.49■□□□□ 0.07
SDF4-203ENST00000403997 TMEM39AQ9NV64 488 aa15.49■□□□□ 0.07
SDF4-203ENST00000403997 A0A0U1RQG5 324 aaPredicted RBP15.48■□□□□ 0.07
SDF4-203ENST00000403997 ARVCFO00192 962 aa15.48■□□□□ 0.07
SDF4-203ENST00000403997 ANTXR2P58335 489 aa15.48■□□□□ 0.07
SDF4-203ENST00000403997 FAAP100Q0VG06 881 aa15.48■□□□□ 0.07
SDF4-203ENST00000403997 DUSP28Q4G0W2 176 aa15.48■□□□□ 0.07
SDF4-203ENST00000403997 CASC1Q6TDU7 716 aa15.48■□□□□ 0.07
SDF4-203ENST00000403997 CXCL17Q6UXB2 119 aa15.48■□□□□ 0.07
SDF4-203ENST00000403997 SYTL5Q8TDW5 730 aaPredicted RBP15.48■□□□□ 0.07
SDF4-203ENST00000403997 TOX2Q96NM4 488 aa15.48■□□□□ 0.07
SDF4-203ENST00000403997 TAAR1Q96RJ0 339 aa15.48■□□□□ 0.07
SDF4-203ENST00000403997 RBM47A0AV96 593 aaKnown RBP15.47■□□□□ 0.07
SDF4-203ENST00000403997 SLC27A2O14975 620 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 ZBTB5O15062 677 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 KIAA0355O15063 1070 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 PRC1O43663 620 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 CABYRO75952 493 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 RAG1P15918 1043 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 EDNRBP24530 442 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 CDK7P50613 346 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 TROAPQ12815 778 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 LRIT3Q3SXY7 679 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 CREB3L3Q68CJ9 461 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 HOMER1Q86YM7 354 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 NSUN6Q8TEA1 469 aaKnown RBP15.47■□□□□ 0.07
SDF4-203ENST00000403997 MTMR8Q96EF0 704 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 PCDHA1Q9Y5I3 950 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 CUL9Q8IWT3 2517 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 LCTP09848 1927 aa15.47■□□□□ 0.07
SDF4-203ENST00000403997 MROH7Q68CQ1 1323 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 PPP1R11O60927 126 aaPredicted RBP15.46■□□□□ 0.07
SDF4-203ENST00000403997 CFBP00751 764 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 ITGB8P26012 769 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 MCM5P33992 734 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 NECTIN1Q15223 517 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 SLC35G1Q2M3R5 365 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 NFXL1Q6ZNB6 911 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 TMTC2Q8N394 836 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 OR6J1Q8NGC5 347 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 SCFD2Q8WU76 684 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 PIGSQ96S52 555 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 RMDN3Q96TC7 470 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 RIOX1Q9H6W3 641 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 LY9Q9HBG7 655 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 GPHNQ9NQX3 736 aaPredicted RBP15.46■□□□□ 0.07
SDF4-203ENST00000403997 COL20A1Q9P218 1284 aa15.46■□□□□ 0.07
SDF4-203ENST00000403997 NKRFO15226 690 aaKnown RBP eCLIP15.45■□□□□ 0.062e-6■■■□□ 17
SDF4-203ENST00000403997 TLR3O15455 904 aaKnown RBP15.45■□□□□ 0.06
SDF4-203ENST00000403997 TRAF1Q13077 416 aa15.45■□□□□ 0.06
SDF4-203ENST00000403997 ITGA7Q13683 1181 aa15.45■□□□□ 0.06
SDF4-203ENST00000403997 PPP2R5BQ15173 497 aa15.45■□□□□ 0.06
SDF4-203ENST00000403997 SHHQ15465 462 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms