RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 PARP14Q460N5 1801 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 HRO43593 1189 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 ZBED4O75132 1171 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 GNAI2P04899 355 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 IQSEC1Q6DN90 963 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 RETREG2Q8NC44 543 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 CHST13Q8NET6 341 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 ANKS1AQ92625 1134 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 ZBED2Q9BTP6 218 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 ANTXR1Q9H6X2 564 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 DCP1AQ9NPI6 582 aaPredicted RBP11.17□□□□□ -0.62
NUP43-204ENST00000403890 DBNLQ9UJU6 430 aaKnown RBP11.17□□□□□ -0.62
NUP43-204ENST00000403890 Q9Y3F1 56 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 MCM3APO60318 1980 aa11.17□□□□□ -0.62
NUP43-204ENST00000403890 LCHNA4D1U4 455 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 BAIAP3O94812 1187 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 IQCF3P0C7M6 154 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 SMPD1P17405 629 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 KCNJ6P48051 423 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 CDK8P49336 464 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 ERVK-21P61565 698 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 CNTN2Q02246 1040 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 SDR42E1Q8WUS8 393 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 TGS1Q96RS0 853 aaKnown RBP11.16□□□□□ -0.62
NUP43-204ENST00000403890 UPF3BQ9BZI7 483 aaKnown RBP11.16□□□□□ -0.62
NUP43-204ENST00000403890 RAVER2Q9HCJ3 691 aaKnown RBP11.16□□□□□ -0.62
NUP43-204ENST00000403890 FAM50BQ9Y247 325 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 CFAP54Q96N23 3096 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 CACNA1HO95180 2353 aa11.16□□□□□ -0.62
NUP43-204ENST00000403890 ASB14A6NK59 587 aa11.15□□□□□ -0.62
NUP43-204ENST00000403890 PTGS1P23219 599 aa11.15□□□□□ -0.62
NUP43-204ENST00000403890 PSEN2P49810 448 aa11.15□□□□□ -0.62
NUP43-204ENST00000403890 PTPN5P54829 565 aa11.15□□□□□ -0.62
NUP43-204ENST00000403890 SLFN5Q08AF3 891 aa11.15□□□□□ -0.62
NUP43-204ENST00000403890 DSG2Q14126 1118 aa11.15□□□□□ -0.62
NUP43-204ENST00000403890 SLC9C2Q5TAH2 1124 aa11.15□□□□□ -0.62
NUP43-204ENST00000403890 FAM9BQ8IZU0 186 aa11.15□□□□□ -0.62
NUP43-204ENST00000403890 NEK9Q8TD19 979 aa11.15□□□□□ -0.62
NUP43-204ENST00000403890 NUP88Q99567 741 aaPredicted RBP11.15□□□□□ -0.62
NUP43-204ENST00000403890 CCDC8Q9H0W5 538 aaPredicted RBP11.15□□□□□ -0.62
NUP43-204ENST00000403890 TLR7Q9NYK1 1049 aaKnown RBP11.15□□□□□ -0.62
NUP43-204ENST00000403890 PRKAG3Q9UGI9 489 aa11.15□□□□□ -0.62
NUP43-204ENST00000403890 MTUS1Q9ULD2 1270 aa11.15□□□□□ -0.62
NUP43-204ENST00000403890 USP17L12C9JPN9 530 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 USP17L21D6R901 530 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 H3BQ06 376 aaPredicted RBP11.14□□□□□ -0.63
NUP43-204ENST00000403890 SURF6O75683 361 aaKnown RBP11.14□□□□□ -0.63
NUP43-204ENST00000403890 PDE6AP16499 860 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 ZP2Q05996 745 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 DMRTA1Q5VZB9 504 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 FAM133AQ8N9E0 248 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.14□□□□□ -0.63
NUP43-204ENST00000403890 ARHGAP45Q92619 1136 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 RAD9AQ99638 391 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 PRRX2Q99811 253 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 SLC38A10Q9HBR0 1119 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 PDGFCQ9NRA1 345 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 POLR3EQ9NVU0 708 aa11.14□□□□□ -0.63
NUP43-204ENST00000403890 USP34Q70CQ2 3546 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 SCN5AQ14524 2016 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 F5H6K3 240 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 OAZ1P54368 228 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 WDR5P61964 334 aaKnown RBP11.13□□□□□ -0.63
NUP43-204ENST00000403890 KLRC3Q07444 240 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 BFSP2Q13515 415 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 TTF1Q15361 905 aaPredicted RBP11.13□□□□□ -0.63
NUP43-204ENST00000403890 FAM47CQ5HY64 1035 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 C12orf60Q5U649 245 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 TAPT1Q6NXT6 567 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 C16orf86Q6ZW13 317 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 TMCO2Q7Z6W1 182 aaPredicted RBP11.13□□□□□ -0.63
NUP43-204ENST00000403890 ADHFE1Q8IWW8 467 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 AMOTL1Q8IY63 956 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 LCORLQ8N3X6 602 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 PRSS33Q8NF86 280 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 KIFC2Q96AC6 838 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 EAF2Q96CJ1 260 aaPredicted RBP11.13□□□□□ -0.63
NUP43-204ENST00000403890 ATP8A2Q9NTI2 1148 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 CTNNA3Q9UI47 895 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 COG6Q9Y2V7 657 aa11.13□□□□□ -0.63
NUP43-204ENST00000403890 RIF1Q5UIP0 2472 aaKnown RBP11.13□□□□□ -0.63
NUP43-204ENST00000403890 TET1Q8NFU7 2136 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 ZNF532Q9HCE3 1301 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 TRIOO75962 3097 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 LINC01553A4QN01 128 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 GFRA3O60609 400 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 GJB5O95377 273 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 NDUFB10O96000 172 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 CT47B1P0C2W7 299 aaPredicted RBP11.12□□□□□ -0.63
NUP43-204ENST00000403890 IRS1P35568 1242 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 PURAQ00577 322 aaKnown RBP11.12□□□□□ -0.63
NUP43-204ENST00000403890 PKN1Q16512 942 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 NBPF20Q3BBV1 942 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 TMEM63BQ5T3F8 832 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 EEPD1Q7L9B9 569 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 BMP8AQ7Z5Y6 402 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 SSH3Q8TE77 659 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 KCTD12Q96CX2 325 aaKnown RBP11.12□□□□□ -0.63
NUP43-204ENST00000403890 CRBNQ96SW2 442 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 412.1 ms