RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 KRT83P78385 493 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 MUM1L1Q5H9M0 696 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 NLRC4Q9NPP4 1024 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 ATP8A2Q9NTI2 1148 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 KBTBD4Q9NVX7 518 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 DMGDHQ9UI17 866 aaKnown RBP13.36□□□□□ -0.27
RBM39-206ENST00000403542 BCORQ6W2J9 1755 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 DOCK2Q92608 1830 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 BCL9LQ86UU0 1499 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 POTEMA6NI47 508 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 RAD21O60216 631 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 RHOBTB3O94955 611 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 SPA17Q15506 151 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 LRRC31Q6UY01 552 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 RRAGAQ7L523 313 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 SRLQ86TD4 932 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 SECISBP2LQ93073 1101 aaKnown RBP13.36□□□□□ -0.27
RBM39-206ENST00000403542 LRRC1Q9BTT6 524 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 SELENOOQ9BVL4 669 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 IFIH1Q9BYX4 1025 aaKnown RBP13.36□□□□□ -0.27
RBM39-206ENST00000403542 HPCAL4Q9UM19 191 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 AKR1B10O60218 316 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 SND1Q7KZF4 910 aaKnown RBP eCLIP13.35□□□□□ -0.27
RBM39-206ENST00000403542 KIAA0895Q8NCT3 520 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 FAM71BQ8TC56 605 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 TBCKQ8TEA7 893 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 SMARCC1Q92922 1105 aaPredicted RBP13.35□□□□□ -0.27
RBM39-206ENST00000403542 MS4A14Q96JA4 679 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 THAP9Q9H5L6 903 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 UTRNP46939 3433 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 CACNA1SQ13698 1873 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 EIF4A3P38919 411 aaKnown RBP13.35□□□□□ -0.27
RBM39-206ENST00000403542 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
RBM39-206ENST00000403542 MIIPQ5JXC2 388 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 C12orf60Q5U649 245 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 DNAAF5Q86Y56 855 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 COA7Q96BR5 231 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 PIGSQ96S52 555 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 RASSF4Q9H2L5 321 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 BARHL2Q9NY43 387 aa13.35□□□□□ -0.27
RBM39-206ENST00000403542 MYH14Q7Z406 1995 aaKnown RBP13.35□□□□□ -0.27
RBM39-206ENST00000403542 LDHBP07195 334 aaKnown RBP13.34□□□□□ -0.27
RBM39-206ENST00000403542 OR52Z1P0C646 297 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 TUBB2AQ13885 445 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 AFAP1L1Q8TED9 768 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 TUBB2BQ9BVA1 445 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 ARHGAP20Q9P2F6 1191 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 SALL4Q9UJQ4 1053 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 ANKRD36CQ5JPF3 1778 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 LRP5O75197 1615 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 ESYT3A0FGR9 886 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 CCNE1P24864 410 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 ZBED6P86452 979 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 GFPT1Q06210 699 aaPredicted RBP13.34□□□□□ -0.27
RBM39-206ENST00000403542 NFIXQ14938 502 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 TDRD12Q587J7 1177 aaKnown RBP13.34□□□□□ -0.27
RBM39-206ENST00000403542 WDR93Q6P2C0 686 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 NUDT12Q9BQG2 462 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 PYM1Q9BRP8 204 aaKnown RBP13.34□□□□□ -0.27
RBM39-206ENST00000403542 TTYH3Q9C0H2 523 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 MYH10P35580 1976 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 A0A1W2PQC6 194 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 SLURP2P0DP57 97 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 RASSF7Q02833 373 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 SETDB2Q96T68 719 aa13.34□□□□□ -0.27
RBM39-206ENST00000403542 FLT1P17948 1338 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 LRRC53A6NM62 1247 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 M0R2N6 131 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 TDP2O95551 362 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 GRM4Q14833 912 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 SF3B3Q15393 1217 aaKnown RBP13.33□□□□□ -0.28
RBM39-206ENST00000403542 PAPD7Q5XG87 772 aaKnown RBP13.33□□□□□ -0.28
RBM39-206ENST00000403542 AMIGO3Q86WK7 504 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 PROCA1Q8NCQ7 364 aaPredicted RBP13.33□□□□□ -0.28
RBM39-206ENST00000403542 ACBD3Q9H3P7 528 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 PACSIN2Q9UNF0 486 aaPredicted RBP13.33□□□□□ -0.28
RBM39-206ENST00000403542 DISP2A7MBM2 1401 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 ZSCAN5CA6NGD5 496 aaPredicted RBP13.33□□□□□ -0.28
RBM39-206ENST00000403542 MYMKA6NI61 221 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 KIF11P52732 1056 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 KCNB1Q14721 858 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 NONOQ15233 471 aaKnown RBP eCLIP13.33□□□□□ -0.28
RBM39-206ENST00000403542 CCDC181Q5TID7 509 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 KCTD16Q68DU8 428 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 CDK5RAP3Q96JB5 506 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 MMTAG2Q9BU76 263 aaKnown RBP13.33□□□□□ -0.28
RBM39-206ENST00000403542 PSD3Q9NYI0 1048 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 PCDHA13Q9Y5I0 950 aa13.33□□□□□ -0.28
RBM39-206ENST00000403542 USP17L5A8MUK1 530 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 SLC37A4O43826 429 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 MEA1Q16626 185 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 SOGA3Q5TF21 947 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 DGKHQ86XP1 1220 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 NELFCDQ8IXH7 590 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 LRRC47Q8N1G4 583 aaKnown RBP13.32□□□□□ -0.28
RBM39-206ENST00000403542 CCDC47Q96A33 483 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms