RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 DDRGK1Q96HY6 314 aa14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 CTAGE1Q96RT6 745 aa14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 ZBTB40Q9NUA8 1239 aa14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 Q9Y3F1 56 aa14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 CTDP1Q9Y5B0 961 aaPredicted RBP14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 PLIN4Q96Q06 1357 aa14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 TTLL1O95922 423 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 ALAS1P13196 640 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 MCCP23508 829 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 DUSP28Q4G0W2 176 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 TSHZ3Q63HK5 1081 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 GIMAP6Q6P9H5 292 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 KIAA1211Q6ZU35 1233 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 HERC6Q8IVU3 1022 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 RPAP2Q8IXW5 612 aaPredicted RBP14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 NEDD1Q8NHV4 660 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 STAG1Q8WVM7 1258 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 INCENPQ9NQS7 918 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 COG5Q9UP83 839 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 COG6Q9Y2V7 657 aa14.19□□□□□ -0.14
SPTLC1P3-201ENST00000403408 ZNF318Q5VUA4 2279 aa14.18□□□□□ -0.14
SPTLC1P3-201ENST00000403408 GTPBP6O43824 516 aaPredicted RBP14.18□□□□□ -0.14
SPTLC1P3-201ENST00000403408 RAB11FIP3O75154 756 aa14.18□□□□□ -0.14
SPTLC1P3-201ENST00000403408 IQCF3P0C7M6 154 aa14.18□□□□□ -0.14
SPTLC1P3-201ENST00000403408 NBPF20Q3BBV1 942 aa14.18□□□□□ -0.14
SPTLC1P3-201ENST00000403408 KCTD1Q719H9 257 aa14.18□□□□□ -0.14
SPTLC1P3-201ENST00000403408 COPS5Q92905 334 aa14.18□□□□□ -0.14
SPTLC1P3-201ENST00000403408 HLA-CQ95604 372 aa14.18□□□□□ -0.14
SPTLC1P3-201ENST00000403408 SEZ6LQ9BYH1 1024 aa14.18□□□□□ -0.14
SPTLC1P3-201ENST00000403408 PRR12Q9ULL5 1215 aa14.18□□□□□ -0.14
SPTLC1P3-201ENST00000403408 SYNPO2Q9UMS6 1093 aa14.18□□□□□ -0.14
SPTLC1P3-201ENST00000403408 RBM47A0AV96 593 aaKnown RBP14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 PI4K2BG5E9Z4 385 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 FOXP2O15409 715 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 GPAA1O43292 621 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 ZEB2O60315 1214 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 NMT2O60551 498 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 PFKMP08237 780 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 STAT2P52630 851 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 ZNF444Q8N0Y2 327 aaPredicted RBP14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 GDPD5Q8WTR4 605 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 GMCL1Q96IK5 515 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 SLC9A7Q96T83 725 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 SEC62Q99442 399 aaKnown RBP14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 WDR11Q9BZH6 1224 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 VTA1Q9NP79 307 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 IL17RBQ9NRM6 502 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 HCN4Q9Y3Q4 1203 aa14.17□□□□□ -0.14
SPTLC1P3-201ENST00000403408 CFAP54Q96N23 3096 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 NFIBO00712 420 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 PLA2G6O60733 806 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 MYL3P08590 195 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 FDX1P10109 184 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 TFAP4Q01664 338 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 BAATQ14032 418 aaPredicted RBP14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 TKFCQ3LXA3 575 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 TTBK2Q6IQ55 1244 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 NSMFQ6X4W1 530 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 ALYREFQ86V81 257 aaKnown RBP14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 FAM160B2Q86V87 743 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 IFNL3Q8IZI9 196 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 KBTBD3Q8NAB2 608 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 PHOSPHO2Q8TCD6 241 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 APPBP2Q92624 585 aa14.16□□□□□ -0.14
SPTLC1P3-201ENST00000403408 RNF113AO15541 343 aaKnown RBP14.15□□□□□ -0.14
SPTLC1P3-201ENST00000403408 ARIH2O95376 493 aa14.15□□□□□ -0.14
SPTLC1P3-201ENST00000403408 SLC1A4P43007 532 aa14.15□□□□□ -0.14
SPTLC1P3-201ENST00000403408 TDO2P48775 406 aa14.15□□□□□ -0.14
SPTLC1P3-201ENST00000403408 ALDH5A1P51649 535 aaPredicted RBP14.15□□□□□ -0.14
SPTLC1P3-201ENST00000403408 DEFB103AP81534 67 aa14.15□□□□□ -0.14
SPTLC1P3-201ENST00000403408 ZSCAN25Q6NSZ9 544 aa14.15□□□□□ -0.14
SPTLC1P3-201ENST00000403408 SLC30A10Q6XR72 485 aa14.15□□□□□ -0.14
SPTLC1P3-201ENST00000403408 CHURC1Q8WUH1 139 aa14.15□□□□□ -0.14
SPTLC1P3-201ENST00000403408 DHX38Q92620 1227 aaKnown RBP14.15□□□□□ -0.14
SPTLC1P3-201ENST00000403408 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.15□□□□□ -0.14
SPTLC1P3-201ENST00000403408 DMDP11532 3685 aa14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 SUPT20HL2P0C7V6 817 aa14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 WDR5P61964 334 aaKnown RBP14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 RCSD1Q6JBY9 416 aa14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 OR6J1Q8NGC5 347 aa14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 CLEC4DQ8WXI8 215 aa14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 MTG1Q9BT17 334 aaPredicted RBP14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 SUGCTQ9HAC7 445 aa14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 POLR3EQ9NVU0 708 aa14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 CCPG1Q9ULG6 757 aa14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 ISY1Q9ULR0 285 aaKnown RBP14.14□□□□□ -0.15
SPTLC1P3-201ENST00000403408 A6NJR5 290 aa14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 PATL2C9JE40 543 aaKnown RBP14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 HMMRO75330 724 aa14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 ICAM1P05362 532 aa14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 TSPY3P0CV98 308 aa14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 TSPY8P0CW00 308 aa14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 RFC2P35250 354 aa14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 SLC16A2P36021 539 aa14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 NOVP48745 357 aa14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 IKQ13123 557 aaPredicted RBP14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 FAM47CQ5HY64 1035 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms