RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 TMCO5BA8MYB1 307 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 ZNF263O14978 683 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 OPA1O60313 960 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 PRPF6O94906 941 aaKnown RBP10.18□□□□□ -0.78
HPS4-203ENST00000402105 CARSP49589 748 aaKnown RBP10.18□□□□□ -0.78
HPS4-203ENST00000402105 MECOMQ03112 1051 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 PFKFB3Q16875 520 aaPredicted RBP10.18□□□□□ -0.78
HPS4-203ENST00000402105 NAALADL2Q58DX5 795 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 EFCAB13Q8IY85 973 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 TRIM58Q8NG06 486 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 SNX12Q9UMY4 172 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 MYO1FO00160 1098 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 SETQ01105 290 aaPredicted RBP10.18□□□□□ -0.78
HPS4-203ENST00000402105 PPFIA1Q13136 1202 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 RAPGEF1Q13905 1077 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 PAPD7Q5XG87 772 aaKnown RBP10.18□□□□□ -0.78
HPS4-203ENST00000402105 DNAJC7Q99615 494 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 TRIM31Q9BZY9 425 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 MYH15Q9Y2K3 1946 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 PNPLA7Q6ZV29 1317 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 A0A087WUV0 522 aaPredicted RBP10.18□□□□□ -0.78
HPS4-203ENST00000402105 TRAF5O00463 557 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 HEXIM1O94992 359 aaKnown RBP10.18□□□□□ -0.78
HPS4-203ENST00000402105 FAM153BP0C7A2 387 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 SRGNP10124 158 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 SLC1A4P43007 532 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 FAM153CQ494X1 144 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 OR2W6PQ8NHA6 318 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 CALML4Q96GE6 196 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 DUSP9Q99956 384 aaKnown RBP10.18□□□□□ -0.78
HPS4-203ENST00000402105 PYM1Q9BRP8 204 aaKnown RBP10.18□□□□□ -0.78
HPS4-203ENST00000402105 ARHGAP20Q9P2F6 1191 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 FAM153AQ9UHL3 310 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 PCDHA4Q9UN74 947 aa10.18□□□□□ -0.78
HPS4-203ENST00000402105 BICDL2A1A5D9 508 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 E7EVH7 732 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 CEP85LQ5SZL2 805 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 TTI2Q6NXR4 508 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 USP17L2Q6R6M4 530 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 MAPKAPK5Q8IW41 473 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 FAM114A1Q8IWE2 563 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 THAP9Q9H5L6 903 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 TMEM260Q9NX78 707 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 ARFGEF2Q9Y6D5 1785 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 KIF13AQ9H1H9 1805 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 SMCO2A6NFE2 343 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 SMIM23A6NLE4 172 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 IFT88Q13099 833 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 DIXDC1Q155Q3 683 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 CT47A1Q5JQC4 288 aaPredicted RBP10.17□□□□□ -0.78
HPS4-203ENST00000402105 ADAT2Q7Z6V5 191 aaKnown RBP10.17□□□□□ -0.78
HPS4-203ENST00000402105 CREG2Q8IUH2 290 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 GLIS3Q8NEA6 775 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 GPR101Q96P66 508 aaPredicted RBP10.17□□□□□ -0.78
HPS4-203ENST00000402105 ZIM3Q96PE6 472 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 RIOK1Q9BRS2 568 aaKnown RBP10.17□□□□□ -0.78
HPS4-203ENST00000402105 NUP58Q9BVL2 599 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 NDST4Q9H3R1 872 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 DCP1AQ9NPI6 582 aaPredicted RBP10.17□□□□□ -0.78
HPS4-203ENST00000402105 MYH8P13535 1937 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 SRCAPQ6ZRS2 3230 aa10.17□□□□□ -0.78
HPS4-203ENST00000402105 CCNE1P24864 410 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 POLR2FP61218 127 aaKnown RBP10.16□□□□□ -0.78
HPS4-203ENST00000402105 PPP2R5BQ15173 497 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 C3orf67Q6ZVT6 689 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 TGFBRAP1Q8WUH2 860 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 JPH2Q9BR39 696 aaPredicted RBP10.16□□□□□ -0.78
HPS4-203ENST00000402105 CARD10Q9BWT7 1032 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 STIM2Q9P246 746 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 PCDHA6Q9UN73 950 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 HYOU1Q9Y4L1 999 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 PCDHA8Q9Y5H6 950 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 PDS5AQ29RF7 1337 aaKnown RBP10.16□□□□□ -0.78
HPS4-203ENST00000402105 GOLGA6L10A6NI86 522 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 DDAH1O94760 285 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 KRT18P05783 430 aaKnown RBP10.16□□□□□ -0.78
HPS4-203ENST00000402105 ERFEQ4G0M1 354 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 SPTY2D1Q68D10 685 aaPredicted RBP10.16□□□□□ -0.78
HPS4-203ENST00000402105 CEP57Q86XR8 500 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 AMOTL1Q8IY63 956 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 ZNF507Q8TCN5 953 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 LRRC15Q8TF66 581 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 KAT2BQ92831 832 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 CELF1Q92879 486 aaKnown RBP10.16□□□□□ -0.78
HPS4-203ENST00000402105 TNFRSF25Q93038 417 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 RPGRIP1Q96KN7 1286 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 VIPAS39Q9H9C1 493 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 SALL4Q9UJQ4 1053 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 MST1RQ04912 1400 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 FRMPD2Q68DX3 1309 aaPredicted RBP10.16□□□□□ -0.78
HPS4-203ENST00000402105 POTEMA6NI47 508 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 RASSF10A6NK89 507 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 GLI1P08151 1106 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 TNNI2P48788 182 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 SV2BQ7L1I2 683 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 DDX42Q86XP3 938 aaKnown RBP eCLIP10.16□□□□□ -0.78
HPS4-203ENST00000402105 GIMAP8Q8ND71 665 aaPredicted RBP10.16□□□□□ -0.78
HPS4-203ENST00000402105 NOX5Q96PH1 765 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 AP1M1Q9BXS5 423 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 TRIM9Q9C026 710 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms