RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 FERMT2Q96AC1 680 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 TMEM47Q9BQJ4 181 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 BRMS1Q9HCU9 246 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 CSADQ9Y600 493 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 SNCAIPQ9Y6H5 919 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 TRPM7Q96QT4 1865 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 GOLGA6L9A6NEM1 432 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 USP17L5A8MUK1 530 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 DDAH1O94760 285 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PKN1Q16512 942 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 KMT5BQ4FZB7 885 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 SPECC1LQ69YQ0 1117 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 TMEM139Q8IV31 216 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 FRMD4AQ9P2Q2 1039 aaPredicted RBP18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 SYNPO2Q9UMS6 1093 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ATP2B1P20020 1258 aa17.99■□□□□ 0.47
CHRFAM7A-203ENST00000401522 REXO1L1PQ8IX06 675 aa17.99■□□□□ 0.47
CHRFAM7A-203ENST00000401522 SRRTQ9BXP5 876 aaKnown RBP17.99■□□□□ 0.47
CHRFAM7A-203ENST00000401522 VPS54Q9P1Q0 977 aa17.99■□□□□ 0.47
CHRFAM7A-203ENST00000401522 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.99■□□□□ 0.47
CHRFAM7A-203ENST00000401522 V9GYY5 206 aaPredicted RBP17.99■□□□□ 0.47
CHRFAM7A-203ENST00000401522 OTOFQ9HC10 1997 aa17.99■□□□□ 0.47
CHRFAM7A-203ENST00000401522 STX10O60499 249 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 TRIM65Q6PJ69 517 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 BAG1Q99933 345 aaPredicted RBP17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 KAT14Q9H8E8 782 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 DNAI1Q9UI46 699 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PRDM4Q9UKN5 801 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 A0A1W2PRG0 241 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 SLFN14P0C7P3 912 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 FBXO38Q6PIJ6 1188 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 GRAMD1CQ8IYS0 662 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PDILTQ8N807 584 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 SHISA4Q96DD7 197 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 WDR18Q9BV38 432 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ARHGEF10LQ9HCE6 1279 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 TMX2Q9Y320 296 aa17.98■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ATP2B2Q01814 1243 aa17.97■□□□□ 0.47
CHRFAM7A-203ENST00000401522 TROAPQ12815 778 aa17.97■□□□□ 0.47
CHRFAM7A-203ENST00000401522 TMTC3Q6ZXV5 915 aa17.97■□□□□ 0.47
CHRFAM7A-203ENST00000401522 SH3RF1Q7Z6J0 888 aa17.97■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PNMA1Q8ND90 353 aa17.97■□□□□ 0.47
CHRFAM7A-203ENST00000401522 CLMNQ96JQ2 1002 aa17.97■□□□□ 0.47
CHRFAM7A-203ENST00000401522 AS3MTQ9HBK9 375 aa17.97■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PPP2R2CQ9Y2T4 447 aa17.97■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ZHX2Q9Y6X8 837 aa17.97■□□□□ 0.47
CHRFAM7A-203ENST00000401522 USP49Q70CQ1 688 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 CCDC84Q86UT8 332 aaPredicted RBP17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ACER1Q8TDN7 264 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 DHX58Q96C10 678 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PKNOX2Q96KN3 472 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 V9GY48 417 aaPredicted RBP17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PLEKHA8P1O95397 391 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ECE1P42892 770 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PPATQ06203 517 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 NR1I3Q14994 352 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ERO1BQ86YB8 467 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 TRMT44Q8IYL2 757 aaKnown RBP17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 TC2NQ8N9U0 490 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ZNF280CQ8ND82 737 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 TNFRSF25Q93038 417 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 SH2D4AQ9H788 454 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ELP3Q9H9T3 547 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 AFG3L2Q9Y4W6 797 aa17.96■□□□□ 0.47
CHRFAM7A-203ENST00000401522 MYH6P13533 1939 aa17.96■□□□□ 0.46
CHRFAM7A-203ENST00000401522 MYH4Q9Y623 1939 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 A0A1B0GTH6 734 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 FAM205CA6NFA0 338 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SPDYE5A6NIY4 337 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 H2AFXP16104 143 aaPredicted RBP17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 GABPB1Q06547 395 aaPredicted RBP17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 GOLGA8FQ08AF8 430 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 GOLGA8DPQ0D2H9 430 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SPATA1Q5VX52 437 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 LRRC47Q8N1G4 583 aaKnown RBP17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 GMCL1P1Q8NEA9 526 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 PAGE5Q96GU1 130 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 GSDMAQ96QA5 445 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 MED15Q96RN5 788 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 KIAA1683Q9H0B3 1180 aa17.95■□□□□ 0.46
CHRFAM7A-203ENST00000401522 PHIPQ8WWQ0 1821 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 VWA3AA6NCI4 1184 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SPP2Q13103 211 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 TTC38Q5R3I4 469 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SAPCD2Q86UD0 394 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 KRT222Q8N1A0 295 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SYMPKQ92797 1274 aaKnown RBP17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SLC10A4Q96EP9 437 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 PYM1Q9BRP8 204 aaKnown RBP17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 FAM53CQ9NYF3 392 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 USP17L10C9JJH3 530 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 F5H6K3 240 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 TRAPPC10P48553 1259 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 BACE1P56817 501 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 KLRC3Q07444 240 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 ERCC6LQ2NKX8 1250 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 HSP90AA4PQ58FG1 418 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 EARS2Q5JPH6 523 aaKnown RBP17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 CTCFLQ8NI51 663 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms