RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 TMEM266Q2M3C6 531 aa17.68■□□□□ 0.42
CDC42-203ENST00000400259 CCDC47Q96A33 483 aaKnown RBP17.68■□□□□ 0.42
CDC42-203ENST00000400259 DHTKD1Q96HY7 919 aaPredicted RBP17.68■□□□□ 0.42
CDC42-203ENST00000400259 NAP1L4Q99733 375 aaKnown RBP17.68■□□□□ 0.42
CDC42-203ENST00000400259 NAA15Q9BXJ9 866 aaKnown RBP17.68■□□□□ 0.42
CDC42-203ENST00000400259 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
CDC42-203ENST00000400259 RAB34Q9BZG1 259 aa17.68■□□□□ 0.42
CDC42-203ENST00000400259 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
CDC42-203ENST00000400259 YDJCA8MPS7 323 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 PSMA7O14818 248 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 TXKP42681 527 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 COPB1P53618 953 aaKnown RBP17.67■□□□□ 0.42
CDC42-203ENST00000400259 PDE4CQ08493 712 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 GRB10Q13322 594 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 EZH2Q15910 746 aaKnown RBP17.67■□□□□ 0.42
CDC42-203ENST00000400259 SLFN13Q68D06 897 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 ZSCAN29Q8IWY8 852 aaPredicted RBP17.67■□□□□ 0.42
CDC42-203ENST00000400259 ANKRD7Q92527 254 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 THAP9Q9H5L6 903 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 LRWD1Q9UFC0 647 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 KIF13BQ9NQT8 1826 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 GOLGA6L9A6NEM1 432 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 FECHP22830 423 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 SLC1A4P43007 532 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 TNNI2P48788 182 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 ETF1P62495 437 aaKnown RBP17.67■□□□□ 0.42
CDC42-203ENST00000400259 ICA1Q05084 483 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 UBE2SQ16763 222 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 PPFIBP1Q86W92 1011 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 IRF2BP1Q8IU81 584 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 CCDC51Q96ER9 411 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 PSTPIP2Q9H939 334 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 SYNPO2Q9UMS6 1093 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 PPP2R2CQ9Y2T4 447 aa17.67■□□□□ 0.42
CDC42-203ENST00000400259 PHLPP2Q6ZVD8 1323 aa17.66■□□□□ 0.42
CDC42-203ENST00000400259 SEPT2Q15019 361 aa17.66■□□□□ 0.42
CDC42-203ENST00000400259 SHROOM1Q2M3G4 852 aaPredicted RBP17.66■□□□□ 0.42
CDC42-203ENST00000400259 QRICH1Q2TAL8 776 aa17.66■□□□□ 0.42
CDC42-203ENST00000400259 NOC3LQ8WTT2 800 aaKnown RBP17.66■□□□□ 0.42
CDC42-203ENST00000400259 GMCL1Q96IK5 515 aa17.66■□□□□ 0.42
CDC42-203ENST00000400259 L2HGDHQ9H9P8 463 aa17.66■□□□□ 0.42
CDC42-203ENST00000400259 BLOC1S4Q9NUP1 217 aa17.66■□□□□ 0.42
CDC42-203ENST00000400259 N4BP3O15049 544 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 PPIP5K2O43314 1243 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 MFAP3LO75121 409 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 EEF1GP26641 437 aaKnown RBP17.65■□□□□ 0.42
CDC42-203ENST00000400259 RBL2Q08999 1139 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 ABCB5Q2M3G0 1257 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 TTI2Q6NXR4 508 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 CNNM4Q6P4Q7 775 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 TRIM65Q6PJ69 517 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 PNMA5Q96PV4 448 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 TDRD3Q9H7E2 651 aaKnown RBP17.65■□□□□ 0.42
CDC42-203ENST00000400259 MAPK8IP1Q9UQF2 711 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDC42-203ENST00000400259 COBLO75128 1261 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 HOXA7P31268 230 aaPredicted RBP17.65■□□□□ 0.42
CDC42-203ENST00000400259 TRIM14Q14142 442 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 CNGA4Q8IV77 575 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 EXOC1Q9NV70 894 aa17.65■□□□□ 0.42
CDC42-203ENST00000400259 DDX25Q9UHL0 483 aaKnown RBP17.65■□□□□ 0.42
CDC42-203ENST00000400259 GYPCP04921 128 aa17.64■□□□□ 0.41
CDC42-203ENST00000400259 CCT6AP40227 531 aaKnown RBP17.64■□□□□ 0.41
CDC42-203ENST00000400259 PMS1P54277 932 aaKnown RBP17.64■□□□□ 0.41
CDC42-203ENST00000400259 CDC37Q16543 378 aaPredicted RBP17.64■□□□□ 0.41
CDC42-203ENST00000400259 TMEM119Q4V9L6 283 aa17.64■□□□□ 0.41
CDC42-203ENST00000400259 SYT10Q6XYQ8 523 aa17.64■□□□□ 0.41
CDC42-203ENST00000400259 PRMT6Q96LA8 375 aaPredicted RBP17.64■□□□□ 0.41
CDC42-203ENST00000400259 PRDM4Q9UKN5 801 aa17.64■□□□□ 0.41
CDC42-203ENST00000400259 TRIM49BA6NDI0 452 aa17.64■□□□□ 0.41
CDC42-203ENST00000400259 ASIC1P78348 528 aa17.64■□□□□ 0.41
CDC42-203ENST00000400259 EN1Q05925 392 aaPredicted RBP17.64■□□□□ 0.41
CDC42-203ENST00000400259 PDE4DQ08499 809 aa17.64■□□□□ 0.41
CDC42-203ENST00000400259 NCBP1Q09161 790 aaKnown RBP17.64■□□□□ 0.41
CDC42-203ENST00000400259 MCTP2Q6DN12 878 aa17.64■□□□□ 0.41
CDC42-203ENST00000400259 SV2BQ7L1I2 683 aa17.64■□□□□ 0.41
CDC42-203ENST00000400259 HAS1Q92839 578 aa17.64■□□□□ 0.41
CDC42-203ENST00000400259 TAB2Q9NYJ8 693 aa17.64■□□□□ 0.41
CDC42-203ENST00000400259 PVALEFA0A1B0GWK0 134 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 BICDL2A1A5D9 508 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 F5H6K3 240 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 SLC26A4O43511 780 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 CCNE1P24864 410 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 USP11P51784 963 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 KLRC3Q07444 240 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 MBOAT7Q96N66 472 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 PSMD1Q99460 953 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 VPS16Q9H269 839 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 PCDHA1Q9Y5I3 950 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 CYP3A7-CYP3A51PA0A087WV96 503 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 C21orf2O43822 256 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 CYP3A7P24462 503 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 AP3B2Q13367 1082 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 CCDC93Q567U6 631 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 KRT79Q5XKE5 535 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 MOXD1Q6UVY6 613 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 TOGARAM2Q6ZUX3 1019 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 RTKN2Q8IZC4 609 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 LARP4BQ92615 738 aaKnown RBP17.63■□□□□ 0.41
CDC42-203ENST00000400259 P2RX5Q93086 422 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms