RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ME3Q16798 604 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 FAM43BQ6ZT52 329 aaPredicted RBP8.67□□□□□ -1.02
USP16-204ENST00000399976 NSUN7Q8NE18 718 aaKnown RBP8.67□□□□□ -1.02
USP16-204ENST00000399976 NUP133Q8WUM0 1156 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 CRYGNQ8WXF5 182 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 CUL5Q93034 780 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 EMID1Q96A84 441 aaPredicted RBP8.67□□□□□ -1.02
USP16-204ENST00000399976 UPF3BQ9BZI7 483 aaKnown RBP8.67□□□□□ -1.02
USP16-204ENST00000399976 PCDHA1Q9Y5I3 950 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 MCM3APO60318 1980 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 ICAM3P32942 547 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 MFSD14CQ5VZR4 134 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 RNF207Q6ZRF8 634 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 ZNF333Q96JL9 665 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 AGBL1Q96MI9 1066 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 KATNBL1Q9H079 304 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 UPF3AQ9H1J1 476 aaKnown RBP8.67□□□□□ -1.02
USP16-204ENST00000399976 RIPK3Q9Y572 518 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.67□□□□□ -1.02
USP16-204ENST00000399976 GCOM1H8Y6P7 765 aaPredicted RBP8.66□□□□□ -1.02
USP16-204ENST00000399976 CPLX1O14810 134 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 POLR2MP0CAP2 368 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 CYBAP13498 195 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 CST5P28325 142 aaPredicted RBP8.66□□□□□ -1.02
USP16-204ENST00000399976 SLC16A2P36021 539 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 AKAP17AQ02040 695 aaKnown RBP8.66□□□□□ -1.02
USP16-204ENST00000399976 NCAPG2Q86XI2 1143 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 CCAR1Q8IX12 1150 aaKnown RBP8.66□□□□□ -1.02
USP16-204ENST00000399976 NSUN6Q8TEA1 469 aaKnown RBP8.66□□□□□ -1.02
USP16-204ENST00000399976 PHF20Q9BVI0 1012 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 ABHD16BQ9H3Z7 469 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 C6orf50Q9HD87 102 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 PAK6Q9NQU5 681 aaPredicted RBP8.66□□□□□ -1.02
USP16-204ENST00000399976 CTDNEP1O95476 244 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 GOLGA8HP0CJ92 632 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 TGFB3P10600 412 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 GRK4P32298 578 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 FLT3LGP49771 235 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 ALDH5A1P51649 535 aaPredicted RBP8.66□□□□□ -1.02
USP16-204ENST00000399976 PRKCZQ05513 592 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 PCNX4Q63HM2 1172 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 WWC2Q6AWC2 1192 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 SYTL5Q8TDW5 730 aaPredicted RBP8.66□□□□□ -1.02
USP16-204ENST00000399976 TINF2Q9BSI4 451 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 LRRC2Q9BYS8 371 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 UBA5Q9GZZ9 404 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 CRISPLD2Q9H0B8 497 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 TRIM17Q9Y577 477 aa8.66□□□□□ -1.02
USP16-204ENST00000399976 POTEB2H3BUK9 544 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 MEIS2O14770 477 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 ADCY3O60266 1144 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 ALAS1P13196 640 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 CPA1P15085 419 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 CIITAP33076 1130 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 MUM1L1Q5H9M0 696 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 RASGRP2Q7LDG7 609 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 CDHR1Q96JP9 859 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 MBOAT7Q96N66 472 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 COBLO75128 1261 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 ADD1P35611 737 aaKnown RBP8.65□□□□□ -1.02
USP16-204ENST00000399976 SREBF1P36956 1147 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 ADCY7P51828 1080 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 ST3GAL1Q11201 340 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 ANKRD35Q8N283 1001 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 RAET1EQ8TD07 263 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 MYL10Q9BUA6 226 aa8.65□□□□□ -1.02
USP16-204ENST00000399976 CYP3A7-CYP3A51PA0A087WV96 503 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 HOXD8P13378 290 aaPredicted RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 CYP3A7P24462 503 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 USP11P51784 963 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 RPS6P62753 249 aaKnown RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 CAP1Q01518 475 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 IQSEC1Q6DN90 963 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 GIMAP8Q8ND71 665 aaPredicted RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 GPRASP2Q96D09 838 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 TSEN34Q9BSV6 310 aaKnown RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 ARHGAP39Q9C0H5 1083 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 CWC22Q9HCG8 908 aaKnown RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 PXMP2Q9NR77 195 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 PCDHA4Q9UN74 947 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 SOWAHBA6NEL2 793 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 K7ELQ4 463 aaPredicted RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 NFIBO00712 420 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 EIF3JO75822 258 aaKnown RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 PDCP20941 246 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 CCDC174Q6PII3 467 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 DPP9Q86TI2 863 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 NPLOC4Q8TAT6 608 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 DDX11Q96FC9 970 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 TMX3Q96JJ7 454 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 MCOLN1Q9GZU1 580 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 PSTPIP2Q9H939 334 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 GABRQQ9UN88 632 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 PTCH2Q9Y6C5 1203 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 GCFC2P16383 781 aaKnown RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 CCND2P30279 289 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 TRAPPC10P48553 1259 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 SETQ01105 290 aaPredicted RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 PLS1Q14651 629 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms