RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 ASIC2Q16515 512 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 HDGFL1Q5TGJ6 251 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 USP33Q8TEY7 942 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 EIF2B5Q13144 721 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 ARMC3Q5W041 872 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 UNC45BQ8IWX7 931 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 SERPINB13Q9UIV8 391 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 GUCY1B2O75343 617 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 ACTN1P12814 892 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 HABP4Q5JVS0 413 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 NARS2Q96I59 477 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 OAS2P29728 719 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 AKNAD1Q5T1N1 836 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 DCTN3O75935 186 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 TRAP1Q12931 704 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 TMEM67Q5HYA8 995 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 TEX2Q8IWB9 1127 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 ZNF555Q8NEP9 628 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 RAB2AP61019 212 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 METTL24Q5JXM2 366 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 HAUS3Q68CZ6 603 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 EXD1Q8NHP7 514 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 PASKQ96RG2 1323 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 MX1P20591 662 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 ADAM30Q9UKF2 790 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 ZMYND11Q15326 602 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 FAM129BQ96TA1 746 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 EPS8L2Q9H6S3 715 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 PAMP19021 973 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 DMC1Q14565 340 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 IMPACTQ9P2X3 320 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 USP47Q96K76 1375 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 RPSAP08865 295 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 RAPGEF1Q13905 1077 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 CCDC103Q8IW40 242 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 GALNT8Q9NY28 637 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 CENPPQ6IPU0 288 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 MRRFQ96E11 262 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 ATAD3AQ9NVI7 634 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 SUGT1Q9Y2Z0 365 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 RPS6KA1Q15418 735 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 ZSCAN9O15535 394 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 SLC25A24Q6NUK1 477 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 TBC1D1Q86TI0 1168 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 NBPF5PQ86XG9 351 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 M0QZ92 97 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 STX7O15400 261 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 PPP1R2P3Q6NXS1 205 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 NOP9Q86U38 636 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 USE1Q9NZ43 259 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 PDZRN3Q9UPQ7 1066 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 KRT38O76015 456 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 TMC5Q6UXY8 1006 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 C4orf50Q6ZRC1 276 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 ZNF839A8K0R7 811 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 TBC1D4O60343 1298 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 AARSP49588 968 aaKnown RBP eCLIP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 MORF4L2Q15014 288 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 THAP11Q96EK4 314 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 SNF8Q96H20 258 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 LSG1Q9H089 658 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 NLRP2Q9NX02 1062 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 STOML2Q9UJZ1 356 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 CHP2O43745 196 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 GNA14O95837 355 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 GPR1P46091 355 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 CDC5LQ99459 802 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 TRPC7Q9HCX4 862 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 APAF1O14727 1248 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 NDUFAF2Q8N183 169 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 PANK1Q8TE04 598 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 UBA2Q9UBT2 640 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 FERMT3Q86UX7 667 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 KLHL20Q9Y2M5 609 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 BRD4O60885 1362 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 SMNDC1O75940 238 aaKnown RBP eCLIP9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 STARD3NLO95772 234 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 ARMCX4Q5H9R4 360 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 ABRAXAS1Q6UWZ7 409 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 RAB20Q9NX57 234 aa9.29□□□□□ -0.92
CACNA1C-220ENST00000399655 SCRN3Q0VDG4 424 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 SLFN12LQ6IEE8 588 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 RGL1Q9NZL6 768 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 PTPRCP08575 1304 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 NOD1Q9Y239 953 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 CBFA2T3O75081 653 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 FAM45AQ8TCE6 357 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 RAD18Q9NS91 495 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 GOLGA8SH3BPF8 625 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 TRIM58Q8NG06 486 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 NCOA7Q8NI08 942 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 KRCC1Q9NPI7 259 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 PRDM2Q13029 1718 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 ZPR1O75312 459 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 CYP19A1P11511 503 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 KRT33BQ14525 404 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 ARMCX6Q7L4S7 300 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 TAB1Q15750 504 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 ZSCAN23Q3MJ62 389 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms