RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 FRMD6Q96NE9 622 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 GSDMAQ96QA5 445 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 KCNG1Q9UIX4 513 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 EIF3CLB5ME19 914 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 ANXA13P27216 316 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 E2F5Q15329 346 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 GLE1Q53GS7 698 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 PLBD2Q8NHP8 589 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 CCDC124Q96CT7 223 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 ZNF215Q9UL58 517 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 TBX22Q9Y458 520 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 A2MP01023 1474 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 KBTBD13C9JR72 458 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 CALUO43852 315 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 TFRCP02786 760 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 PTPREP23469 700 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 TRIM32Q13049 653 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 LONRF2Q1L5Z9 754 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 CCDC90BQ9GZT6 254 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 EEF1GP26641 437 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 CEP78Q5JTW2 689 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 MAP3K21Q5TCX8 1036 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 KHDRBS2Q5VWX1 349 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 RSRC2Q7L4I2 434 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 MYCT1Q8N699 235 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 GFM2Q969S9 779 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 SLC38A10Q9HBR0 1119 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 TFDP1Q14186 410 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 TRIML1Q8N9V2 468 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 HIPK4Q8NE63 616 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 DYDC2Q96IM9 177 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 CYTH2Q99418 400 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 PTPN22Q9Y2R2 807 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 RPRD2Q5VT52 1461 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 C21orf2O43822 256 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 SOX5P35711 763 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 ZNF157P51786 506 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 IRX4P78413 519 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 NBPF20Q3BBV1 942 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 ENOX1Q8TC92 643 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 KIF17Q9P2E2 1029 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 THAP12O43422 761 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 KRT7P08729 469 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 TCF3P15923 654 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 ASPHQ12797 758 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 EIF4A2Q14240 407 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 MTHFSDQ2M296 383 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 RNF219Q5W0B1 726 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 DNAJC7Q99615 494 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 POLKQ9UBT6 870 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 WDR17Q8IZU2 1322 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 SART1O43290 800 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 ZFXP17010 805 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 PHACTR3Q96KR7 559 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 STAM2O75886 525 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 POLR2MP0CAP2 368 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 SLC9A1P19634 815 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 RAB44Q7Z6P3 723 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 TTLL11Q8NHH1 800 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 SNX19Q92543 992 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 ZNF518AQ6AHZ1 1483 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 LRRD1A4D1F6 860 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 GAS7O60861 476 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 ANO1Q5XXA6 986 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 ZNF277Q9NRM2 450 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 NPATQ14207 1427 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 GPC4O75487 556 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 KLHL18O94889 574 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 POLGP54098 1239 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 DONSONQ9NYP3 566 aa12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 DBNLQ9UJU6 430 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-217ENST00000399641 VWA3AA6NCI4 1184 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 SYCE1LA8MT33 242 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 UBXN8O00124 270 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 SLC8A1P32418 973 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 ARHGAP4P98171 946 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 INAQ16352 499 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 C1orf131Q8NDD1 294 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 ZNF790Q6PG37 636 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 TPH2Q8IWU9 490 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 NELFCDQ8IXH7 590 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 NCF2P19878 526 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 NONOQ15233 471 aaKnown RBP eCLIP12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 Q6ZUG5 572 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 RNPEPQ9H4A4 650 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 FAM8A1Q9UBU6 413 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 URB2Q14146 1524 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 POC1B-GALNT4F8VUJ3 575 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 DTNBO60941 627 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 ADCY8P40145 1251 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 ABCB5Q2M3G0 1257 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 EEPD1Q7L9B9 569 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 PLEKHH1Q9ULM0 1364 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 TXKP42681 527 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 LIG4P49917 911 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms