RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 H0YCG3 227 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 RBM6P78332 1123 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 FAM95CA0A1B0GW59 222 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 DEXIO95424 95 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 CLCA2Q9UQC9 943 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 SOS1Q07889 1333 aaPredicted RBP11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 HADHQ16836 314 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 SYT10Q6XYQ8 523 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 TACO1Q9BSH4 297 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 TRAPPC8Q9Y2L5 1435 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 GCKRQ14397 625 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 HHATQ5VTY9 493 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 AFG1LQ8WV93 481 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 IWS1Q96ST2 819 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 SLC13A4Q9UKG4 626 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 PCDHB13Q9Y5F0 798 aa11.98□□□□□ -0.49
CACNA1C-210ENST00000399606 SOX5P35711 763 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 ECE1P42892 770 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 LRCH2Q5VUJ6 765 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 RNF10Q8N5U6 811 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 HAUS8Q9BT25 410 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 ZFYVE28Q9HCC9 887 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 HELLSQ9NRZ9 838 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 KRT3P12035 628 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 PPP2R3AQ06190 1150 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 ADAT2Q7Z6V5 191 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 RNF168Q8IYW5 571 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 VCX3AQ9NNX9 186 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 STK38LQ9Y2H1 464 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 OCM2P0CE71 109 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 OCMP0CE72 109 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 LMNB1P20700 586 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 CIITAP33076 1130 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 CABP7Q86V35 215 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 NUDCD3Q8IVD9 361 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 C1orf112Q9NSG2 853 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 HACD3Q9P035 362 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 ASIC3Q9UHC3 531 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 XDHP47989 1333 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 ZNF532Q9HCE3 1301 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 PRDM15P57071 1507 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 ZNF233A6NK53 670 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 MAP3K7CLP57077 242 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 TRPC7Q9HCX4 862 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 H0YC42 278 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 NVLO15381 856 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 DCAF4L1Q3SXM0 396 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 SDE2Q6IQ49 451 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 REXO1Q8N1G1 1221 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 MCUQ8NE86 351 aa11.97□□□□□ -0.49
CACNA1C-210ENST00000399606 GPAA1O43292 621 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 ESRRBO95718 433 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 SDSP20132 328 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 ATP8B2P98198 1209 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 TAB3Q8N5C8 712 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 CACTINQ8WUQ7 758 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 LRRC4Q9HBW1 653 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 ATP8A2Q9NTI2 1148 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 RAB20Q9NX57 234 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 ACTN4O43707 911 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 TAF1CQ15572 869 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 MYL10Q9BUA6 226 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 BCAP29Q9UHQ4 241 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 REREQ9P2R6 1566 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 USP19O94966 1318 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 NPR1P16066 1061 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 INPP5BP32019 993 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 PRKCQQ04759 706 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 LGSNQ5TDP6 509 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 GPBP1Q86WP2 473 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 MGARPQ8TDB4 240 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 HAUS1Q96CS2 278 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 GBP5Q96PP8 586 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 ESYT1Q9BSJ8 1104 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 SMYD2Q9NRG4 433 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 CEP170Q5SW79 1584 aa11.96□□□□□ -0.49
CACNA1C-210ENST00000399606 OPHN1O60890 802 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 F13A1P00488 732 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 TBC1D8BQ0IIM8 1120 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 ATL3Q6DD88 541 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 ABTB1Q969K4 478 aaPredicted RBP11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 MMP19Q99542 508 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 ZNF804BA4D1E1 1349 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 GOLGA8HP0CJ92 632 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 TTC38Q5R3I4 469 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 SLC7A3Q8WY07 619 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 NLRP4Q96MN2 994 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 PLCB1Q9NQ66 1216 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 BAG5Q9UL15 447 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.5
CACNA1C-210ENST00000399606 VGLL3A8MV65 326 aa11.95□□□□□ -0.5
CACNA1C-210ENST00000399606 MAP3K13O43283 966 aa11.95□□□□□ -0.5
CACNA1C-210ENST00000399606 SRGAP2CP0DJJ0 459 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms