RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 ZNF543Q08ER8 600 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 STK4Q13043 487 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 PDIA5Q14554 519 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 TMEM266Q2M3C6 531 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 ANKRD40Q6AI12 368 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 SV2BQ7L1I2 683 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 TUBGCP2Q9BSJ2 902 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 RAB34Q9BZG1 259 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 MYO1AQ9UBC5 1043 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 STK17AQ9UEE5 414 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 LRWD1Q9UFC0 647 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 CDC23Q9UJX2 597 aa15.34■□□□□ 0.05
PTPN6-202ENST00000399448 EIF6P56537 245 aaKnown RBP15.33■□□□□ 0.04
PTPN6-202ENST00000399448 GABPB1Q06547 395 aaPredicted RBP15.33■□□□□ 0.04
PTPN6-202ENST00000399448 GRB10Q13322 594 aa15.33■□□□□ 0.04
PTPN6-202ENST00000399448 TSR1Q2NL82 804 aaKnown RBP15.33■□□□□ 0.04
PTPN6-202ENST00000399448 GOLGA1Q92805 767 aa15.33■□□□□ 0.04
PTPN6-202ENST00000399448 DNAJC7Q99615 494 aa15.33■□□□□ 0.04
PTPN6-202ENST00000399448 NUP58Q9BVL2 599 aa15.33■□□□□ 0.04
PTPN6-202ENST00000399448 JMJD4Q9H9V9 463 aa15.33■□□□□ 0.04
PTPN6-202ENST00000399448 RIC8AQ9NPQ8 531 aa15.33■□□□□ 0.04
PTPN6-202ENST00000399448 EPN1Q9Y6I3 576 aaPredicted RBP15.33■□□□□ 0.04
PTPN6-202ENST00000399448 C10orf71Q711Q0 1435 aa15.33■□□□□ 0.04
PTPN6-202ENST00000399448 CTAGE9A4FU28 777 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 PES1O00541 588 aaKnown RBP15.32■□□□□ 0.04
PTPN6-202ENST00000399448 EDIL3O43854 480 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 ZRANB2O95218 330 aaKnown RBP eCLIP15.32■□□□□ 0.04
PTPN6-202ENST00000399448 NPR1P16066 1061 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 ARHGAP25P42331 645 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 HHIPL2Q6UWX4 724 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 RETREG2Q8NC44 543 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 CHP1Q99653 195 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 FHOD1Q9Y613 1164 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 PVALEFA0A1B0GWK0 134 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 B4DLN1 442 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 SHMT1P34896 483 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 TEX35Q5T0J7 233 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 SRGAP1Q7Z6B7 1085 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 ADGRF4Q8IZF3 695 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 CEP112Q8N8E3 955 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 PNMA5Q96PV4 448 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 SLF1Q9BQI6 1058 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 BLOC1S4Q9NUP1 217 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 MYH8P13535 1937 aa15.32■□□□□ 0.04
PTPN6-202ENST00000399448 QSER1Q2KHR3 1735 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 ATP8B1O43520 1251 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 SLC37A4O43826 429 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 TRIM37O94972 964 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 NDUFA10O95299 355 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 TDP2O95551 362 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 HLA-DOAP06340 250 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 FCER1AP12319 257 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 HOXA7P31268 230 aaPredicted RBP15.31■□□□□ 0.04
PTPN6-202ENST00000399448 GPATCH4Q5T3I0 446 aaKnown RBP15.31■□□□□ 0.04
PTPN6-202ENST00000399448 PPP4R3AQ6IN85 833 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 CDC42EP5Q6NZY7 148 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 UNC13DQ70J99 1090 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 SLC35F6Q8N357 371 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 CDK5RAP3Q96JB5 506 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 MYMKA6NI61 221 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 PNMA6AP0CW24 399 aaPredicted RBP15.31■□□□□ 0.04
PTPN6-202ENST00000399448 ALDH1B1P30837 517 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 CLK2P49760 499 aaKnown RBP15.31■□□□□ 0.04
PTPN6-202ENST00000399448 MRPL12P52815 198 aaKnown RBP15.31■□□□□ 0.04
PTPN6-202ENST00000399448 TUBB4BP68371 445 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 TBC1D8BQ0IIM8 1120 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 DOK7Q18PE1 504 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 CENPPQ6IPU0 288 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 CLEC10AQ8IUN9 316 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 NLGN1Q8N2Q7 840 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 TEKT1Q969V4 418 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 CNOT6LQ96LI5 555 aaKnown RBP15.31■□□□□ 0.04
PTPN6-202ENST00000399448 MXD3Q9BW11 206 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 LRRC27Q9C0I9 530 aa15.31■□□□□ 0.04
PTPN6-202ENST00000399448 QTRT2Q9H974 415 aaKnown RBP15.31■□□□□ 0.04
PTPN6-202ENST00000399448 MTIF2P46199 727 aaKnown RBP15.3■□□□□ 0.04
PTPN6-202ENST00000399448 SCNN1DP51172 638 aa15.3■□□□□ 0.04
PTPN6-202ENST00000399448 MCM6Q14566 821 aa15.3■□□□□ 0.04
PTPN6-202ENST00000399448 KRT79Q5XKE5 535 aa15.3■□□□□ 0.04
PTPN6-202ENST00000399448 TTBK2Q6IQ55 1244 aa15.3■□□□□ 0.04
PTPN6-202ENST00000399448 APOBEC3HQ6NTF7 200 aaKnown RBP15.3■□□□□ 0.04
PTPN6-202ENST00000399448 ZSCAN29Q8IWY8 852 aaPredicted RBP15.3■□□□□ 0.04
PTPN6-202ENST00000399448 KIAA0895Q8NCT3 520 aa15.3■□□□□ 0.04
PTPN6-202ENST00000399448 LARP4BQ92615 738 aaKnown RBP15.3■□□□□ 0.04
PTPN6-202ENST00000399448 CUL5Q93034 780 aa15.3■□□□□ 0.04
PTPN6-202ENST00000399448 CCDC17Q96LX7 622 aa15.3■□□□□ 0.04
PTPN6-202ENST00000399448 NAPGQ99747 312 aaPredicted RBP15.3■□□□□ 0.04
PTPN6-202ENST00000399448 EPC1Q9H2F5 836 aa15.3■□□□□ 0.04
PTPN6-202ENST00000399448 G3V3G9 751 aa15.29■□□□□ 0.04
PTPN6-202ENST00000399448 PPP1R11O60927 126 aaPredicted RBP15.29■□□□□ 0.04
PTPN6-202ENST00000399448 TNNI2P48788 182 aa15.29■□□□□ 0.04
PTPN6-202ENST00000399448 CHMP4BP1P59074 171 aa15.29■□□□□ 0.04
PTPN6-202ENST00000399448 MEA1Q16626 185 aa15.29■□□□□ 0.04
PTPN6-202ENST00000399448 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
PTPN6-202ENST00000399448 WDR59Q6PJI9 974 aa15.29■□□□□ 0.04
PTPN6-202ENST00000399448 KRT27Q7Z3Y8 459 aa15.29■□□□□ 0.04
PTPN6-202ENST00000399448 PROM2Q8N271 834 aa15.29■□□□□ 0.04
PTPN6-202ENST00000399448 RAD54LQ92698 747 aa15.29■□□□□ 0.04
PTPN6-202ENST00000399448 MTMR8Q96EF0 704 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms