RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 AFAP1L2Q8N4X5 818 aa10.46□□□□□ -0.73
SMAD9-203ENST00000399275 NELFBQ8WX92 580 aa10.46□□□□□ -0.73
SMAD9-203ENST00000399275 SART1O43290 800 aaKnown RBP10.46□□□□□ -0.73
SMAD9-203ENST00000399275 E2F6O75461 281 aa10.46□□□□□ -0.73
SMAD9-203ENST00000399275 STX3Q13277 289 aa10.46□□□□□ -0.73
SMAD9-203ENST00000399275 ZNF710Q8N1W2 664 aa10.46□□□□□ -0.73
SMAD9-203ENST00000399275 LRRC8CQ8TDW0 803 aa10.46□□□□□ -0.73
SMAD9-203ENST00000399275 PANX2Q96RD6 677 aa10.46□□□□□ -0.73
SMAD9-203ENST00000399275 ZBTB3Q9H5J0 574 aa10.46□□□□□ -0.73
SMAD9-203ENST00000399275 TRMT112Q9UI30 125 aaKnown RBP10.46□□□□□ -0.73
SMAD9-203ENST00000399275 PACSIN2Q9UNF0 486 aaPredicted RBP10.46□□□□□ -0.73
SMAD9-203ENST00000399275 LSM1O15116 133 aaKnown RBP10.46□□□□□ -0.74
SMAD9-203ENST00000399275 S100A9P06702 114 aaKnown RBP10.46□□□□□ -0.74
SMAD9-203ENST00000399275 ARID5AQ03989 594 aa10.46□□□□□ -0.74
SMAD9-203ENST00000399275 KBTBD12Q3ZCT8 623 aa10.46□□□□□ -0.74
SMAD9-203ENST00000399275 CNNM4Q6P4Q7 775 aa10.46□□□□□ -0.74
SMAD9-203ENST00000399275 CFAP36Q96G28 342 aa10.46□□□□□ -0.74
SMAD9-203ENST00000399275 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.46□□□□□ -0.74
SMAD9-203ENST00000399275 MYO5CQ9NQX4 1742 aa10.46□□□□□ -0.74
SMAD9-203ENST00000399275 SLC39A14Q15043 492 aa10.46□□□□□ -0.74
SMAD9-203ENST00000399275 SLC35F6Q8N357 371 aa10.46□□□□□ -0.74
SMAD9-203ENST00000399275 CSGALNACT2Q8N6G5 542 aa10.46□□□□□ -0.74
SMAD9-203ENST00000399275 SPDYE1Q8NFV5 336 aaPredicted RBP10.46□□□□□ -0.74
SMAD9-203ENST00000399275 TEKT4Q8WW24 435 aa10.46□□□□□ -0.74
SMAD9-203ENST00000399275 DBNDD2Q9BQY9 259 aa10.46□□□□□ -0.74
SMAD9-203ENST00000399275 DTNBO60941 627 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 PDE6AP16499 860 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 MAGEA1P43355 309 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 SUCLG2Q96I99 432 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 POLR3CQ9BUI4 534 aaPredicted RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 FTOQ9C0B1 505 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 RAD21L1Q9H4I0 556 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 PAPOLBQ9NRJ5 636 aaKnown RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 CCPG1Q9ULG6 757 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 MED14O60244 1454 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 MAP3K19Q56UN5 1328 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 CCDC169A6NNP5 214 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 TRIM16O95361 564 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 RXRAP19793 462 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 LMNB1P20700 586 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 CARSP49589 748 aaKnown RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 GEN1Q17RS7 908 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 CLMNQ96JQ2 1002 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 METTL22Q9BUU2 404 aaPredicted RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 ASCC2Q9H1I8 757 aaPredicted RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 C19orf44Q9H6X5 657 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 TMEM165Q9HC07 324 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 RGL1Q9NZL6 768 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 TRIM17Q9Y577 477 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 CLIC4Q9Y696 253 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 PCP4L1A6NKN8 68 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 NUTM2BA6NNL0 878 aaPredicted RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 NUTM2EB1AL46 878 aaPredicted RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 CTNND1O60716 968 aaKnown RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 AP1G2O75843 785 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 IFNAR2P48551 515 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 MRPS35P82673 323 aaKnown RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 SLC9C1Q4G0N8 1177 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 BICDL1Q6ZP65 573 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 RNF217Q8TC41 542 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 PPWD1Q96BP3 646 aaKnown RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 ZNF148Q9UQR1 794 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 CDC42BPAQ5VT25 1732 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 LARGE1O95461 756 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 FMNL1O95466 1100 aaPredicted RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 SLC4A1P02730 911 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 KRT3P12035 628 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 EPHB4P54760 987 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 DAB2P98082 770 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 TBL3Q12788 808 aaKnown RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 MRPL28Q13084 256 aaKnown RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 LONRF3Q496Y0 759 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 CCDC84Q86UT8 332 aaPredicted RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 NSUN7Q8NE18 718 aaKnown RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 CCT6BQ92526 530 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 IFIH1Q9BYX4 1025 aaKnown RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 EPS15L1Q9UBC2 864 aa10.45□□□□□ -0.74
SMAD9-203ENST00000399275 WARS2Q9UGM6 360 aaKnown RBP10.45□□□□□ -0.74
SMAD9-203ENST00000399275 KCNJ18B7U540 433 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 DIAPH2O60879 1101 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 NBNO60934 754 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 KCNJ12Q14500 433 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 ZNF174Q15697 407 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 LINC00301Q8NCQ3 95 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 CYTH2Q99418 400 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 ABCB6Q9NP58 842 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.44□□□□□ -0.74
SMAD9-203ENST00000399275 EPN1Q9Y6I3 576 aaPredicted RBP10.44□□□□□ -0.74
SMAD9-203ENST00000399275 KDRP35968 1356 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 SPAG7O75391 227 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 TAF5LO75529 589 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 YY1P25490 414 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 PDIA3P30101 505 aaKnown RBP10.44□□□□□ -0.74
SMAD9-203ENST00000399275 RAD23BP54727 409 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 SESTD1Q86VW0 696 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 KCTD17Q8N5Z5 321 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 CRNKL1Q9BZJ0 848 aaKnown RBP10.44□□□□□ -0.74
SMAD9-203ENST00000399275 CSRNP2Q9H175 543 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 PREX2Q70Z35 1606 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 CROCC2H7BZ55 1655 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms