RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 BRD3Q15059 726 aa16.25■□□□□ 0.19
CCDC144A-205ENST00000399264 LRRC41Q15345 812 aa16.25■□□□□ 0.19
CCDC144A-205ENST00000399264 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
CCDC144A-205ENST00000399264 KCNK18Q7Z418 384 aa16.25■□□□□ 0.19
CCDC144A-205ENST00000399264 ZNF804AQ7Z570 1209 aa16.25■□□□□ 0.19
CCDC144A-205ENST00000399264 CCDC155Q8N6L0 562 aa16.25■□□□□ 0.19
CCDC144A-205ENST00000399264 MXD3Q9BW11 206 aa16.25■□□□□ 0.19
CCDC144A-205ENST00000399264 NHEJ1Q9H9Q4 299 aaPredicted RBP16.25■□□□□ 0.19
CCDC144A-205ENST00000399264 BLOC1S4Q9NUP1 217 aa16.25■□□□□ 0.19
CCDC144A-205ENST00000399264 L1RE1Q9UN81 338 aa16.25■□□□□ 0.19
CCDC144A-205ENST00000399264 LEMD3Q9Y2U8 911 aa16.25■□□□□ 0.19
CCDC144A-205ENST00000399264 MYH1P12882 1939 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 MYMKA6NI61 221 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 ATP8B1O43520 1251 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 CCNE1P24864 410 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 STIM1Q13586 685 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 PRR5LQ6MZQ0 368 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 NEDD1Q8NHV4 660 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 NOC4LQ9BVI4 516 aaKnown RBP16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 GPCPD1Q9NPB8 672 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 DNM2P50570 870 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 GRB10Q13322 594 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 TRAPPC3LQ5T215 181 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 RRP36Q96EU6 259 aaKnown RBP16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 SPZ1Q9BXG8 430 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 FAM207AQ9NSI2 230 aaPredicted RBP16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 LRRC4BQ9NT99 713 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 POLLQ9UGP5 575 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 MYH10P35580 1976 aa16.24■□□□□ 0.19
CCDC144A-205ENST00000399264 A0A1W2PQC6 194 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 PDE2AO00408 941 aaPredicted RBP16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 GSTO1P78417 241 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 TMED8Q6PL24 325 aaPredicted RBP16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 TRAPPC11Q7Z392 1133 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 KIAA1328Q86T90 577 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 PNMA5Q96PV4 448 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 C6orf50Q9HD87 102 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 ADAM21Q9UKJ8 722 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 GPR75-ASB3A0A0A6YYF3 556 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 LRRIQ3A6PVS8 624 aaPredicted RBP16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 PRPHP41219 470 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 ECM1Q16610 540 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 UBE2SQ16763 222 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 GSPT2Q8IYD1 628 aaKnown RBP16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 REXO1Q8N1G1 1221 aaKnown RBP16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 DHTKD1Q96HY7 919 aaPredicted RBP16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 DDX60LQ5H9U9 1706 aaKnown RBP16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 TTBK2Q6IQ55 1244 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 KRT25Q7Z3Z0 450 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 DRC1Q96MC2 740 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 C7orf25Q9BPX7 421 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 KANSL2Q9H9L4 492 aa16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 SEC63Q9UGP8 760 aaKnown RBP16.23■□□□□ 0.19
CCDC144A-205ENST00000399264 CDK5RAP2Q96SN8 1893 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 RIMBP2O15034 1052 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 IDEP14735 1019 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 SLC16A2P36021 539 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 WHAMMP3Q1A5X7 153 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 TSR1Q2NL82 804 aaKnown RBP16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 SOGA3Q5TF21 947 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 GALNT17Q6IS24 598 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 JAKMIP2Q96AA8 810 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 VPS18Q9P253 973 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 MAST2Q6P0Q8 1798 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 NAV1Q8NEY1 1877 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 LDHCP07864 332 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 PDHBP11177 359 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 AKR1B1P15121 316 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 MEA1Q16626 185 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 RPGRQ92834 1020 aaKnown RBP16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 PSMB7Q99436 277 aa16.22■□□□□ 0.19
CCDC144A-205ENST00000399264 PSMD14O00487 310 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 CASP8Q14790 479 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 HAUS4Q9H6D7 363 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 LRWD1Q9UFC0 647 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 BTAF1O14981 1849 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 COL24A1Q17RW2 1714 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 UTRNP46939 3433 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 LAD1O00515 517 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 PPP1R11O60927 126 aaPredicted RBP16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 GNA11P29992 359 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 APBA1Q02410 837 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 SHROOM1Q2M3G4 852 aaPredicted RBP16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 ANKRD13CQ8N6S4 541 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 HNRNPLLQ8WVV9 542 aaKnown RBP16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 MTMR9Q96QG7 549 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 DDX4Q9NQI0 724 aaKnown RBP16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 SMARCAL1Q9NZC9 954 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 FAN1Q9Y2M0 1017 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 SAR1BQ9Y6B6 198 aa16.21■□□□□ 0.19
CCDC144A-205ENST00000399264 C6orf229H3BNL8 230 aa16.2■□□□□ 0.18
CCDC144A-205ENST00000399264 TNNI2P48788 182 aa16.2■□□□□ 0.18
CCDC144A-205ENST00000399264 GTF2IP78347 998 aa16.2■□□□□ 0.18
CCDC144A-205ENST00000399264 CALCRLQ16602 461 aa16.2■□□□□ 0.18
CCDC144A-205ENST00000399264 HDXQ7Z353 690 aa16.2■□□□□ 0.18
CCDC144A-205ENST00000399264 FGFBP2Q9BYJ0 223 aa16.2■□□□□ 0.18
CCDC144A-205ENST00000399264 MLXIPQ9HAP2 919 aa16.2■□□□□ 0.18
CCDC144A-205ENST00000399264 MYO1AQ9UBC5 1043 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms