RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 MYH6P13533 1939 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 PNMA6FA0A0J9YX94 578 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 EPB41L2O43491 1005 aaKnown RBP16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CALM1P0DP23 149 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CALM2P0DP24 149 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CALM3P0DP25 149 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 COL6A1P12109 1028 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CASTP20810 708 aaKnown RBP16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 BLOC1S2Q6QNY1 142 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 Q6ZUG5 572 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 RGS22Q8NE09 1264 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 HTATIP2Q9BUP3 242 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 SPZ1Q9BXG8 430 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 XPNPEP3Q9NQH7 507 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 COL20A1Q9P218 1284 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 ADD3Q9UEY8 706 aaKnown RBP16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 FAM184BQ9ULE4 1060 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.34■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CFBP00751 764 aa16.34■□□□□ 0.21
HLA-DQB1-202ENST00000399079 IRX5P78411 483 aaPredicted RBP16.34■□□□□ 0.21
HLA-DQB1-202ENST00000399079 FGD1P98174 961 aa16.34■□□□□ 0.21
HLA-DQB1-202ENST00000399079 LRRC41Q15345 812 aa16.34■□□□□ 0.21
HLA-DQB1-202ENST00000399079 SYNE3Q6ZMZ3 975 aa16.34■□□□□ 0.21
HLA-DQB1-202ENST00000399079 FBXO16Q8IX29 292 aaPredicted RBP16.34■□□□□ 0.21
HLA-DQB1-202ENST00000399079 ARRDC4Q8NCT1 418 aa16.34■□□□□ 0.21
HLA-DQB1-202ENST00000399079 SYTL5Q8TDW5 730 aaPredicted RBP16.34■□□□□ 0.21
HLA-DQB1-202ENST00000399079 SENP6Q9GZR1 1112 aaPredicted RBP16.34■□□□□ 0.21
HLA-DQB1-202ENST00000399079 PDGFCQ9NRA1 345 aa16.34■□□□□ 0.21
HLA-DQB1-202ENST00000399079 KLF18A0A0U1RQI7 1052 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 hCG_1642624A0A1W2PR95 340 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 DNM1LO00429 736 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 PTGS1P23219 599 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 RPS6KB1P23443 525 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 ADCYAP1R1P41586 468 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 GNAQP50148 359 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 APOBRQ0VD83 1088 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 TMEM63BQ5T3F8 832 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 MCF2L2Q86YR7 1114 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 MORC4Q8TE76 937 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 BRF1Q92994 677 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 RRP36Q96EU6 259 aaKnown RBP16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 TAAR1Q96RJ0 339 aa16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 NAP1L2Q9ULW6 460 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB1-202ENST00000399079 ZBTB43O43298 467 aa16.32■□□□□ 0.2
HLA-DQB1-202ENST00000399079 PSMA5P28066 241 aa16.32■□□□□ 0.2
HLA-DQB1-202ENST00000399079 SMARCA1P28370 1054 aa16.32■□□□□ 0.2
HLA-DQB1-202ENST00000399079 HOXA13P31271 388 aaPredicted RBP16.32■□□□□ 0.2
HLA-DQB1-202ENST00000399079 TAPT1Q6NXT6 567 aa16.32■□□□□ 0.2
HLA-DQB1-202ENST00000399079 TMTC3Q6ZXV5 915 aa16.32■□□□□ 0.2
HLA-DQB1-202ENST00000399079 DNERQ8NFT8 737 aa16.32■□□□□ 0.2
HLA-DQB1-202ENST00000399079 LZTS2Q9BRK4 669 aa16.32■□□□□ 0.2
HLA-DQB1-202ENST00000399079 SYNRGQ9UMZ2 1314 aa16.32■□□□□ 0.2
HLA-DQB1-202ENST00000399079 MYADML2A6NDP7 307 aa16.31■□□□□ 0.2
HLA-DQB1-202ENST00000399079 KBTBD13C9JR72 458 aa16.31■□□□□ 0.2
HLA-DQB1-202ENST00000399079 ADAMTS4O75173 837 aa16.31■□□□□ 0.2
HLA-DQB1-202ENST00000399079 RUFY3Q7L099 469 aa16.31■□□□□ 0.2
HLA-DQB1-202ENST00000399079 UPF3BQ9BZI7 483 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB1-202ENST00000399079 ZSWIM6Q9HCJ5 1215 aa16.31■□□□□ 0.2
HLA-DQB1-202ENST00000399079 EVI5O60447 810 aa16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 DUSP11O75319 330 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 SEC24BO95487 1268 aa16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 EDNRBP24530 442 aa16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 CDC27P30260 824 aa16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 HSD17B4P51659 736 aa16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 ATN1P54259 1190 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 TNFAIP2Q03169 654 aa16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 PDE4DQ08499 809 aa16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 NOL8Q76FK4 1167 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 FERMT2Q96AC1 680 aa16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 RMDN3Q96TC7 470 aa16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 FAM217BQ9NTX9 383 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 SEC63Q9UGP8 760 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 CEP290O15078 2479 aa16.3■□□□□ 0.2
HLA-DQB1-202ENST00000399079 GOLGA8AA7E2F4 631 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 GOLGA8BA8MQT2 603 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 SMPD1P17405 629 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 RTN1Q16799 776 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 LRRC26Q2I0M4 334 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 PRPF38BQ5VTL8 546 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 RNF180Q86T96 592 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 NSUN6Q8TEA1 469 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 AGXT2Q9BYV1 514 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 MAF1Q9H063 256 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 VTA1Q9NP79 307 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 RANBP2P49792 3224 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 LOC102724159A0A0B4J2E5 919 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 H0YGN5 161 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 C6orf222P0C671 652 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 EIF2AK2P19525 551 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 ADD1P35611 737 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 GHRHRQ02643 423 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 FUT2Q10981 343 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 TRAF1Q13077 416 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 PWP2Q15269 919 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 FBXL16Q8N461 479 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 RBM28Q9NW13 759 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 PCDH10Q9P2E7 1040 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 GNEQ9Y223 722 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 CYP46A1Q9Y6A2 500 aa16.29■□□□□ 0.2
HLA-DQB1-202ENST00000399079 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms